Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.29□□□□□ -1.88
SIRPAP78324 NDUFB1P1-201ENST00000435191 180 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 HSPD1P21-201ENST00000436541 245 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MTCO2P16-201ENST00000436962 677 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC005094.1-201ENST00000440420 368 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.29□□□□□ -1.88
SIRPAP78324 SSXP4-201ENST00000451349 245 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 RNA5SP269-201ENST00000459032 137 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 RNA5SP310-201ENST00000459084 116 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC078785.3-201ENST00000476607 425 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC026784.1-201ENST00000507986 352 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.29□□□□□ -1.88
SIRPAP78324 RNU6-1256P-201ENST00000516539 103 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.29□□□□□ -1.88
SIRPAP78324 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.29□□□□□ -1.88
SIRPAP78324 AC022690.1-201ENST00000526681 550 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 NACA-211ENST00000548563 827 ntTSL 5 BASIC3.29□□□□□ -1.88
SIRPAP78324 RPL21P5-201ENST00000554662 472 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 RPL23AP84-201ENST00000571193 464 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MIR4425-201ENST00000580572 84 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MIR4444-1-201ENST00000581696 74 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MIR4444-2-201ENST00000584390 74 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC009977.1-201ENST00000586015 570 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 HMGN1P30-201ENST00000589286 268 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC008277.2-201ENST00000605196 797 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.29□□□□□ -1.88
SIRPAP78324 AC135507.1-201ENST00000607214 561 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AL592295.2-201ENST00000612578 206 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AL390240.1-201ENST00000612950 384 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC025594.3-201ENST00000613068 790 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC004696.1-201ENST00000614345 607 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC092140.2-201ENST00000618027 521 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC012314.7-201ENST00000619693 93 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MIR6075-201ENST00000620782 95 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 AC091953.2-201ENST00000623979 160 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.29□□□□□ -1.88
SIRPAP78324 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.29□□□□□ -1.88
SIRPAP78324 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.29□□□□□ -1.88
SIRPAP78324 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.29□□□□□ -1.88
SIRPAP78324 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
SIRPAP78324 AC092104.1-201ENST00000497346 1441 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC010733.2-201ENST00000589496 5702 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 ZNF807-201ENST00000328088 1707 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 SDAD1P2-201ENST00000441308 2028 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 Y_RNA.77-201ENST00000362962 107 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 MRPL42P2-201ENST00000403169 426 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 HMGN1P14-201ENST00000412459 517 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 HMGB3P20-201ENST00000417997 600 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC068533.1-201ENST00000418542 415 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 BX842559.1-201ENST00000419615 532 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 SEPT2P1-201ENST00000419651 180 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL365338.1-201ENST00000422282 858 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 TRIM60P10Y-201ENST00000425589 751 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL356867.1-201ENST00000429623 299 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 SETP8-201ENST00000435341 628 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 TRIM60P8Y-201ENST00000436338 762 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 TAF9P1-201ENST00000445421 515 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC073387.1-201ENST00000453261 709 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.28□□□□□ -1.88
SIRPAP78324 TAF9P2-201ENST00000454958 515 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC3.28□□□□□ -1.88
SIRPAP78324 ASH1L-IT1-201ENST00000458371 448 ntTSL 5 BASIC3.28□□□□□ -1.88
SIRPAP78324 RPL7P49-201ENST00000471402 708 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 AP002453.2-201ENST00000533503 320 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.28□□□□□ -1.88
SIRPAP78324 MIR3118-1-201ENST00000581787 76 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 BNIP3P22-201ENST00000593399 556 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC022146.1-201ENST00000595307 847 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC073544.2-201ENST00000601155 540 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 SEPT7P9-203ENST00000604116 343 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC008962.1-201ENST00000605729 304 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 U3.45-201ENST00000607547 219 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC108479.2-201ENST00000617314 601 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AC006338.1-201ENST00000618453 749 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 AL732372.2-225ENST00000642124 456 ntBASIC3.28□□□□□ -1.88
SIRPAP78324 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.28□□□□□ -1.88
SIRPAP78324 RTN4-208ENST00000404909 4102 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
SIRPAP78324 PCDH11X-208ENST00000504220 4017 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.89
SIRPAP78324 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC3.27□□□□□ -1.89
SIRPAP78324 RAD17-206ENST00000358030 2648 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
SIRPAP78324 SLC2A2-201ENST00000314251 3210 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIRPAP78324 AC138915.3-201ENST00000562908 1389 ntBASIC3.27□□□□□ -1.89
SIRPAP78324 PWAR6-201ENST00000552334 4618 ntBASIC3.27□□□□□ -1.89
SIRPAP78324 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC3.27□□□□□ -1.89
SIRPAP78324 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIRPAP78324 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
SIRPAP78324 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms