Protein–RNA interactions for Protein: P62312

LSM6, U6 snRNA-associated Sm-like protein LSm6, humanhuman

Known RBP Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P62312 NANOGP5-201ENST00000424456 877 ntBASIC2.04□□□□□ -2.08
LSM6P62312 TMSB4XP1-201ENST00000424567 135 ntBASIC2.04□□□□□ -2.08
LSM6P62312 MORF4L1P7-201ENST00000426038 703 ntBASIC2.04□□□□□ -2.08
LSM6P62312 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.04□□□□□ -2.08
LSM6P62312 TAAR7P-201ENST00000436141 242 ntBASIC2.04□□□□□ -2.08
LSM6P62312 KRTAP19-11P-201ENST00000439851 104 ntBASIC2.04□□□□□ -2.08
LSM6P62312 RPS26P30-201ENST00000443431 335 ntBASIC2.04□□□□□ -2.08
LSM6P62312 HGF-207ENST00000453018 721 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM6P62312 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM6P62312 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM6P62312 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM6P62312 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC2.04□□□□□ -2.08
LSM6P62312 SCARNA11.3-201ENST00000517276 130 ntBASIC2.04□□□□□ -2.08
LSM6P62312 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 AP000889.2-201ENST00000532684 490 ntBASIC2.04□□□□□ -2.08
LSM6P62312 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.04□□□□□ -2.08
LSM6P62312 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 GAS5-AS1-201ENST00000602767 694 ntBASIC2.04□□□□□ -2.08
LSM6P62312 AC103710.4-201ENST00000609301 899 ntBASIC2.04□□□□□ -2.08
LSM6P62312 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.04□□□□□ -2.08
LSM6P62312 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.04□□□□□ -2.08
LSM6P62312 AC012640.5-201ENST00000623897 319 ntBASIC2.04□□□□□ -2.08
LSM6P62312 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.04□□□□□ -2.08
LSM6P62312 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC2.03□□□□□ -2.08
LSM6P62312 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.03□□□□□ -2.08
LSM6P62312 DDX10P1-201ENST00000448545 1933 ntBASIC2.03□□□□□ -2.08
LSM6P62312 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM6P62312 AL356057.1-202ENST00000402263 756 ntBASIC2.03□□□□□ -2.08
LSM6P62312 RNU2-15P-201ENST00000410692 191 ntBASIC2.03□□□□□ -2.08
LSM6P62312 RPS7P9-201ENST00000414704 586 ntBASIC2.03□□□□□ -2.08
LSM6P62312 Z85995.1-201ENST00000415547 335 ntBASIC2.03□□□□□ -2.08
LSM6P62312 GTF2IP20-201ENST00000431663 360 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 RN7SL636P-201ENST00000497504 294 ntBASIC2.03□□□□□ -2.08
LSM6P62312 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM6P62312 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
LSM6P62312 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC2.03□□□□□ -2.08
LSM6P62312 AL390838.2-201ENST00000602394 274 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AL031176.1-201ENST00000604554 466 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AC026790.2-201ENST00000606282 430 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AC046143.2-201ENST00000609789 160 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AC096586.1-201ENST00000610267 561 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AL592148.2-201ENST00000612210 372 ntBASIC2.03□□□□□ -2.08
LSM6P62312 MIR6766-201ENST00000622641 72 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AC025034.2-201ENST00000623264 286 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AC090772.4-201ENST00000623599 362 ntBASIC2.03□□□□□ -2.08
LSM6P62312 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.03□□□□□ -2.08
LSM6P62312 AC010329.5-201ENST00000623497 2174 ntBASIC2.03□□□□□ -2.08
LSM6P62312 ZNF720P1-201ENST00000562403 1939 ntBASIC2.03□□□□□ -2.08
LSM6P62312 AKAP9-203ENST00000359028 12247 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
LSM6P62312 CCSAP-202ENST00000366686 4399 ntTSL 2 BASIC2.02□□□□□ -2.09
LSM6P62312 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.02□□□□□ -2.09
LSM6P62312 U3.12-201ENST00000364498 214 ntBASIC2.02□□□□□ -2.09
LSM6P62312 SNORA36C-201ENST00000384289 132 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AL035405.1-201ENST00000400795 710 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AL591416.1-201ENST00000404015 867 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC004014.1-201ENST00000413406 538 ntTSL 4 BASIC2.02□□□□□ -2.09
LSM6P62312 AC099548.1-201ENST00000421443 426 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM6P62312 ATP5F1P1-201ENST00000433775 569 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AL512844.2-201ENST00000433990 593 ntBASIC2.02□□□□□ -2.09
LSM6P62312 RPS15AP28-201ENST00000435088 386 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM6P62312 ANKRD26P4-201ENST00000455755 950 ntBASIC2.02□□□□□ -2.09
LSM6P62312 RPL31P50-201ENST00000471002 296 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC107626.1-201ENST00000471084 183 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC126389.1-201ENST00000477436 290 ntBASIC2.02□□□□□ -2.09
LSM6P62312 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM6P62312 GTF2IP9-201ENST00000502460 301 ntBASIC2.02□□□□□ -2.09
LSM6P62312 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM6P62312 OR5AK1P-201ENST00000524837 922 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AP001646.1-201ENST00000527936 915 ntBASIC2.02□□□□□ -2.09
LSM6P62312 SETP7-201ENST00000552169 453 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.02□□□□□ -2.09
LSM6P62312 AC027176.1-201ENST00000560204 514 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC093838.1-201ENST00000613014 469 ntBASIC2.02□□□□□ -2.09
LSM6P62312 AC007998.5-201ENST00000622938 237 ntBASIC2.02□□□□□ -2.09
LSM6P62312 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
LSM6P62312 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
LSM6P62312 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM6P62312 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM6P62312 OR4G11P-202ENST00000642116 1414 ntBASIC2.01□□□□□ -2.09
LSM6P62312 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM6P62312 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM6P62312 AL596028.1-201ENST00000326971 197 ntBASIC2.01□□□□□ -2.09
LSM6P62312 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM6P62312 FTLP6-201ENST00000355274 422 ntBASIC2.01□□□□□ -2.09
LSM6P62312 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
LSM6P62312 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC2.01□□□□□ -2.09
LSM6P62312 MIRLET7G-201ENST00000362280 84 ntBASIC2.01□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 97.8 ms