Protein–RNA interactions for Protein: P62310

LSM3, U6 snRNA-associated Sm-like protein LSm3, humanhuman

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P62310 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC1.59□□□□□ -2.15
LSM3P62310 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 AL358075.3-201ENST00000426289 226 ntBASIC1.59□□□□□ -2.15
LSM3P62310 IFNA20P-201ENST00000436840 528 ntBASIC1.59□□□□□ -2.15
LSM3P62310 ARF4P4-201ENST00000439608 520 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC1.59□□□□□ -2.15
LSM3P62310 FGF7P5-201ENST00000441829 291 ntBASIC1.59□□□□□ -2.15
LSM3P62310 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 MTATP6P7-201ENST00000453315 681 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC117386.2-202ENST00000472821 522 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC1.59□□□□□ -2.15
LSM3P62310 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 AC107886.1-201ENST00000526935 516 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC1.59□□□□□ -2.15
LSM3P62310 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC1.59□□□□□ -2.15
LSM3P62310 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC1.59□□□□□ -2.15
LSM3P62310 AC068790.3-201ENST00000602988 553 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC007179.3-201ENST00000604976 235 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC103710.1-201ENST00000610003 901 ntBASIC1.59□□□□□ -2.15
LSM3P62310 MIR7106-201ENST00000612419 65 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC1.59□□□□□ -2.15
LSM3P62310 AC006386.2-201ENST00000624491 75 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC012005.1-201ENST00000624575 75 ntBASIC1.59□□□□□ -2.15
LSM3P62310 AC068620.4-201ENST00000636730 1182 ntBASIC1.59□□□□□ -2.15
LSM3P62310 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC1.59□□□□□ -2.16
LSM3P62310 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC1.59□□□□□ -2.16
LSM3P62310 DDX10P1-201ENST00000448545 1933 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RNU6-173P-201ENST00000364215 104 ntBASIC1.58□□□□□ -2.16
LSM3P62310 U3.12-201ENST00000364498 214 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RNU6-921P-201ENST00000384361 107 ntBASIC1.58□□□□□ -2.16
LSM3P62310 SNORA64-201ENST00000384674 134 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RNU6-220P-201ENST00000390919 107 ntBASIC1.58□□□□□ -2.16
LSM3P62310 SNORA48.2-201ENST00000390926 124 ntBASIC1.58□□□□□ -2.16
LSM3P62310 FABP12P1-201ENST00000401911 322 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RPL7P27-201ENST00000403775 720 ntBASIC1.58□□□□□ -2.16
LSM3P62310 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 PAICSP7-201ENST00000419829 962 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RPP40P1-201ENST00000426762 456 ntBASIC1.58□□□□□ -2.16
LSM3P62310 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 MTND4LP10-201ENST00000435146 291 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC090774.1-201ENST00000435925 246 ntBASIC1.58□□□□□ -2.16
LSM3P62310 USP9YP15-201ENST00000442391 422 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC009237.8-201ENST00000445492 379 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 TRGVB-201ENST00000453257 471 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.58□□□□□ -2.16
LSM3P62310 DYNLL1P5-201ENST00000467158 270 ntBASIC1.58□□□□□ -2.16
LSM3P62310 RPL7P18-201ENST00000478965 734 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC104090.1-201ENST00000506341 1171 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 AC104997.1-201ENST00000519761 717 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AP001317.1-201ENST00000531194 960 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC1.58□□□□□ -2.16
LSM3P62310 AC026464.5-201ENST00000562497 722 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LSM3P62310 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 RPP40P2-201ENST00000603596 712 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AL355877.2-201ENST00000603670 358 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 TP73-AS1.1-201ENST00000611447 161 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC020658.4-201ENST00000613987 684 ntBASIC1.58□□□□□ -2.16
LSM3P62310 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 AL731566.2-201ENST00000618971 317 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AL162373.1-201ENST00000620433 407 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC091932.3-201ENST00000624223 323 ntBASIC1.58□□□□□ -2.16
LSM3P62310 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC1.58□□□□□ -2.16
LSM3P62310 AC011477.1-204ENST00000623416 1325 ntBASIC1.58□□□□□ -2.16
LSM3P62310 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.58□□□□□ -2.16
LSM3P62310 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.57□□□□□ -2.16
LSM3P62310 AL137003.2-201ENST00000606924 2538 ntBASIC1.57□□□□□ -2.16
LSM3P62310 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC1.57□□□□□ -2.16
LSM3P62310 RNU6-1151P-201ENST00000384684 107 ntBASIC1.57□□□□□ -2.16
LSM3P62310 MIR17-201ENST00000385012 84 ntBASIC1.57□□□□□ -2.16
LSM3P62310 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.57□□□□□ -2.16
LSM3P62310 RNU6-920P-201ENST00000410926 92 ntBASIC1.57□□□□□ -2.16
LSM3P62310 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM3P62310 MTND1P33-201ENST00000446251 917 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM3P62310 RPS20P24-201ENST00000457473 361 ntBASIC1.57□□□□□ -2.16
LSM3P62310 SNORD121B-201ENST00000458838 81 ntBASIC1.57□□□□□ -2.16
LSM3P62310 CABYRP1-201ENST00000465493 1045 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC072039.1-201ENST00000477611 581 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC007182.2-201ENST00000489251 402 ntBASIC1.57□□□□□ -2.16
LSM3P62310 CAB39P1-201ENST00000502277 460 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC097462.2-201ENST00000504623 481 ntBASIC1.57□□□□□ -2.16
LSM3P62310 SUMO2P6-201ENST00000505273 288 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC1.57□□□□□ -2.16
LSM3P62310 RNU6-1095P-201ENST00000516148 108 ntBASIC1.57□□□□□ -2.16
LSM3P62310 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM3P62310 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC1.57□□□□□ -2.16
LSM3P62310 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM3P62310 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC1.57□□□□□ -2.16
LSM3P62310 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC1.57□□□□□ -2.16
LSM3P62310 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC1.57□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 164.1 ms