Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 BNIP3P11-201ENST00000603878 563 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC016727.1-205ENST00000605437 569 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC008536.2-201ENST00000607284 349 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AL590282.1-201ENST00000610379 1136 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC2.98□□□□□ -1.93
LMO4P61968 AC004009.2-201ENST00000623016 728 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC091905.1-201ENST00000624400 311 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC110994.2-201ENST00000635481 492 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC099654.5-201ENST00000636479 350 ntBASIC2.98□□□□□ -1.93
LMO4P61968 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 ABBA01000935.2-201ENST00000637477 838 ntBASIC2.98□□□□□ -1.93
LMO4P61968 MFF-206ENST00000392059 1710 ntTSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 MTND5P1-201ENST00000445440 1375 ntBASIC2.98□□□□□ -1.93
LMO4P61968 CASC19-280ENST00000642102 1351 ntBASIC2.98□□□□□ -1.93
LMO4P61968 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC2.98□□□□□ -1.93
LMO4P61968 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC2.98□□□□□ -1.93
LMO4P61968 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC2.98□□□□□ -1.93
LMO4P61968 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 AC073346.2-201ENST00000624724 2058 ntBASIC2.97□□□□□ -1.93
LMO4P61968 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 GABRG2-213ENST00000639046 3058 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 PTPN22-211ENST00000538253 3575 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 Y_RNA.11-201ENST00000362375 109 ntBASIC2.97□□□□□ -1.93
LMO4P61968 Y_RNA.61-201ENST00000362835 102 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNU6-1249P-201ENST00000363237 111 ntBASIC2.97□□□□□ -1.93
LMO4P61968 U8.3-201ENST00000363321 132 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNU6-289P-201ENST00000364093 107 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNY4P34-201ENST00000364779 95 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNU6-534P-201ENST00000364877 106 ntBASIC2.97□□□□□ -1.93
LMO4P61968 SNORA9-201ENST00000384215 133 ntBASIC2.97□□□□□ -1.93
LMO4P61968 MT-TL1-201ENST00000386347 75 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNU6-876P-201ENST00000391295 104 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AL583834.1-201ENST00000406943 343 ntBASIC2.97□□□□□ -1.93
LMO4P61968 MIR320C1-201ENST00000408566 88 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RN7SKP266-201ENST00000410232 287 ntBASIC2.97□□□□□ -1.93
LMO4P61968 DBIP2-201ENST00000419076 262 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AL391219.1-201ENST00000422570 483 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 AC012498.1-201ENST00000424037 437 ntBASIC2.97□□□□□ -1.93
LMO4P61968 USP9YP36-201ENST00000424581 829 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 RSU1P2-202ENST00000437884 485 ntBASIC2.97□□□□□ -1.93
LMO4P61968 SNRPEP7-201ENST00000438350 220 ntBASIC2.97□□□□□ -1.93
LMO4P61968 MTND4LP16-201ENST00000440828 295 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 AC079448.1-201ENST00000449377 373 ntBASIC2.97□□□□□ -1.93
LMO4P61968 FGF7P3-201ENST00000454645 303 ntBASIC2.97□□□□□ -1.93
LMO4P61968 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 MTCO1P42-201ENST00000457379 726 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RNU7-136P-201ENST00000458819 69 ntBASIC2.97□□□□□ -1.93
LMO4P61968 RPS15AP17-201ENST00000470598 390 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 AC091951.2-201ENST00000500762 203 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC008628.2-201ENST00000502605 298 ntBASIC2.97□□□□□ -1.93
LMO4P61968 HMGB1P29-201ENST00000505659 499 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 LINC02315-201ENST00000515218 696 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 AC109466.1-204ENST00000519570 717 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 FAM92A1P1-201ENST00000528023 890 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AP003122.4-201ENST00000530980 758 ntBASIC2.97□□□□□ -1.93
LMO4P61968 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.97□□□□□ -1.93
LMO4P61968 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC2.97□□□□□ -1.93
LMO4P61968 BNIP3P9-201ENST00000603714 553 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC006077.1-201ENST00000604746 343 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC008277.2-201ENST00000605196 797 ntBASIC2.97□□□□□ -1.93
LMO4P61968 BRDTP1-201ENST00000605735 677 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AL158211.4-201ENST00000606988 584 ntBASIC2.97□□□□□ -1.93
LMO4P61968 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.97□□□□□ -1.93
LMO4P61968 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.97□□□□□ -1.93
LMO4P61968 uc_338.32-201ENST00000615087 172 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 AL355365.1-201ENST00000616480 294 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC104260.1-201ENST00000616660 539 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC012150.2-201ENST00000621300 544 ntBASIC2.97□□□□□ -1.93
LMO4P61968 PCBP1-AS1-348ENST00000629506 667 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 LRRC77P-213ENST00000637727 880 ntBASIC2.97□□□□□ -1.93
LMO4P61968 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC2.97□□□□□ -1.93
LMO4P61968 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC2.97□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms