Protein–RNA interactions for Protein: P61247

RPS3A, 40S ribosomal protein S3a, humanhuman

Known RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3AP61247 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 RN7SKP280-201ENST00000364196 304 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 RNU6-213P-201ENST00000384051 104 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 TRAJ17-201ENST00000390520 63 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
RPS3AP61247 MRPL42P2-201ENST00000403169 426 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AL359634.1-202ENST00000404721 284 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 SNORA3.3-201ENST00000408712 125 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 RN7SKP202-201ENST00000410439 330 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 RN7SKP140-201ENST00000411196 284 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 HMGN1P14-201ENST00000412459 517 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC007390.1-201ENST00000415722 356 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC017079.2-201ENST00000416102 485 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AL451054.2-201ENST00000420896 202 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.52□□□□□ -1.85
RPS3AP61247 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 TBCAP1-201ENST00000436520 327 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 HMGN2P20-201ENST00000437531 273 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 RPS29P7-201ENST00000439662 171 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 PGBD4P3-201ENST00000440731 581 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 RANP8-201ENST00000444720 713 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.52□□□□□ -1.85
RPS3AP61247 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.52□□□□□ -1.85
RPS3AP61247 AC016696.1-201ENST00000446949 318 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 ST13P20-201ENST00000447996 1065 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.52□□□□□ -1.85
RPS3AP61247 SSXP1-201ENST00000453640 473 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 U3.44-201ENST00000458938 192 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 snoU109.1-201ENST00000459339 135 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC012181.1-201ENST00000479895 423 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 AC117532.1-201ENST00000514638 323 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.52□□□□□ -1.85
RPS3AP61247 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 CARD18-201ENST00000526823 627 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 AP003122.4-201ENST00000530980 758 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.52□□□□□ -1.85
RPS3AP61247 AC005771.1-201ENST00000585581 349 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 HMGN1P30-201ENST00000589286 268 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 CKS1BP3-201ENST00000600888 237 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC015726.1-201ENST00000602353 681 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 AC013553.2-201ENST00000604244 589 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.52□□□□□ -1.85
RPS3AP61247 AL354798.1-201ENST00000622505 329 ntBASIC3.52□□□□□ -1.85
RPS3AP61247 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
RPS3AP61247 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
RPS3AP61247 AC093908.1-201ENST00000623125 8092 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
RPS3AP61247 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 AC091152.2-201ENST00000591628 2569 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.51□□□□□ -1.85
RPS3AP61247 RNY4P16-201ENST00000364768 94 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AP002088.1-201ENST00000382740 395 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 HLFP1-201ENST00000402375 499 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPS3AP61247 RNA5SP293-201ENST00000410527 113 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 RN7SKP142-201ENST00000411236 328 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AL513331.1-201ENST00000411908 397 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 HMGB3P23-201ENST00000414981 585 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 SPA17P1-201ENST00000416656 452 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC019097.1-201ENST00000424783 735 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC3.51□□□□□ -1.85
RPS3AP61247 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.51□□□□□ -1.85
RPS3AP61247 NANOGP10-201ENST00000453325 895 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AL033528.1-201ENST00000453780 140 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 RPS27P29-201ENST00000463110 252 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC068724.1-201ENST00000487100 792 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 TRBV12-2-201ENST00000489763 344 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 RN7SL323P-201ENST00000494712 295 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.51□□□□□ -1.85
RPS3AP61247 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.51□□□□□ -1.85
RPS3AP61247 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 MTND5P13-201ENST00000513046 1079 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 Y_RNA.672-201ENST00000516289 104 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 OR5G4P-201ENST00000525251 760 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AP003181.2-201ENST00000528941 181 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.51□□□□□ -1.85
RPS3AP61247 AC106785.1-201ENST00000565935 262 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 AC135507.1-201ENST00000607214 561 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC005344.1-201ENST00000613391 459 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 XIST_intron.1-201ENST00000619444 68 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 AC110801.1-201ENST00000623590 212 ntBASIC3.51□□□□□ -1.85
RPS3AP61247 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
RPS3AP61247 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
RPS3AP61247 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
RPS3AP61247 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.5□□□□□ -1.85
RPS3AP61247 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.5□□□□□ -1.85
RPS3AP61247 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
RPS3AP61247 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
RPS3AP61247 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms