Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 AC026801.2-201ENST00000515352 425 ntBASIC2.14□□□□□ -2.07
ACTBP60709 RNU6-1282P-201ENST00000516735 96 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 AP000889.2-201ENST00000532684 490 ntBASIC2.14□□□□□ -2.07
ACTBP60709 PRELID2P1-201ENST00000552837 301 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AC090971.2-201ENST00000558142 510 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC2.14□□□□□ -2.07
ACTBP60709 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
ACTBP60709 AC007619.2-201ENST00000605743 379 ntBASIC2.14□□□□□ -2.07
ACTBP60709 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC2.14□□□□□ -2.07
ACTBP60709 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.14□□□□□ -2.07
ACTBP60709 ZNF849P-201ENST00000594711 1566 ntBASIC2.14□□□□□ -2.07
ACTBP60709 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.14□□□□□ -2.07
ACTBP60709 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.13□□□□□ -2.07
ACTBP60709 MTCO1P23-201ENST00000415223 1526 ntBASIC2.13□□□□□ -2.07
ACTBP60709 MIRLET7G-201ENST00000362280 84 ntBASIC2.13□□□□□ -2.07
ACTBP60709 SNORA5B-201ENST00000363786 132 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNA5SP456-201ENST00000364002 114 ntBASIC2.13□□□□□ -2.07
ACTBP60709 SNORD114-30-201ENST00000364448 72 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNU6-481P-201ENST00000384194 107 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNU6-932P-201ENST00000391108 106 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AL360182.1-201ENST00000397433 468 ntBASIC2.13□□□□□ -2.07
ACTBP60709 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ACTBP60709 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.13□□□□□ -2.07
ACTBP60709 MORF4L1P6-201ENST00000418771 268 ntBASIC2.13□□□□□ -2.07
ACTBP60709 Z80107.1-201ENST00000436830 412 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC241584.1-201ENST00000438469 1241 ntBASIC2.13□□□□□ -2.07
ACTBP60709 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.13□□□□□ -2.07
ACTBP60709 RAC1P7-201ENST00000445367 377 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC009237.8-201ENST00000445492 379 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC2.13□□□□□ -2.07
ACTBP60709 AL096803.2-201ENST00000450032 677 ntBASIC2.13□□□□□ -2.07
ACTBP60709 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC2.13□□□□□ -2.07
ACTBP60709 AP001486.1-201ENST00000463339 476 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC097493.1-201ENST00000463958 372 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AL049873.1-201ENST00000480540 376 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC096576.1-201ENST00000489014 359 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC069306.1-201ENST00000507006 843 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC112673.1-201ENST00000513168 575 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNU5A-7P-201ENST00000515979 116 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNU6-885P-201ENST00000516607 104 ntBASIC2.13□□□□□ -2.07
ACTBP60709 RNU6-928P-201ENST00000516876 104 ntBASIC2.13□□□□□ -2.07
ACTBP60709 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AP003467.2-201ENST00000520175 319 ntBASIC2.13□□□□□ -2.07
ACTBP60709 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.13□□□□□ -2.07
ACTBP60709 AC118942.1-201ENST00000529674 1035 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC015688.2-201ENST00000584523 262 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC004160.1-210ENST00000599875 689 ntTSL 5 BASIC2.13□□□□□ -2.07
ACTBP60709 U4.3-201ENST00000621047 82 ntBASIC2.13□□□□□ -2.07
ACTBP60709 AC010872.1-201ENST00000624225 675 ntBASIC2.13□□□□□ -2.07
ACTBP60709 MIR7515-201ENST00000637837 67 ntBASIC2.13□□□□□ -2.07
ACTBP60709 DBF4P1-201ENST00000412976 1892 ntBASIC2.13□□□□□ -2.07
ACTBP60709 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.13□□□□□ -2.07
ACTBP60709 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 OR5J1P-201ENST00000313544 939 ntBASIC2.12□□□□□ -2.07
ACTBP60709 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.12□□□□□ -2.07
ACTBP60709 USP9YP27-201ENST00000418455 438 ntBASIC2.12□□□□□ -2.07
ACTBP60709 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.12□□□□□ -2.07
ACTBP60709 RSL24D1P8-201ENST00000434442 492 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AL512661.1-201ENST00000434586 1253 ntBASIC2.12□□□□□ -2.07
ACTBP60709 MTCO3P43-201ENST00000440974 771 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
ACTBP60709 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.12□□□□□ -2.07
ACTBP60709 RNU7-140P-201ENST00000459546 60 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC147055.4-201ENST00000504399 745 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC107222.1-201ENST00000510899 637 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC2.12□□□□□ -2.07
ACTBP60709 SCARNA11.3-201ENST00000517276 130 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC026616.1-201ENST00000523157 525 ntBASIC2.12□□□□□ -2.07
ACTBP60709 SETP7-201ENST00000552169 453 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 GTF3AP2-201ENST00000557014 266 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 AL731537.2-201ENST00000561565 951 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC093519.1-201ENST00000566109 298 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC025281.1-201ENST00000567026 265 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AC105224.1-201ENST00000587055 421 ntBASIC2.12□□□□□ -2.07
ACTBP60709 ATP1B3P1-201ENST00000605365 821 ntBASIC2.12□□□□□ -2.07
ACTBP60709 OR10AB1P-201ENST00000609613 938 ntBASIC2.12□□□□□ -2.07
ACTBP60709 AL161782.1-201ENST00000622930 586 ntTSL 3 BASIC2.12□□□□□ -2.07
ACTBP60709 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.12□□□□□ -2.07
ACTBP60709 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 DLD-214ENST00000639772 421 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 DDX10P1-201ENST00000448545 1933 ntBASIC2.12□□□□□ -2.07
ACTBP60709 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
ACTBP60709 AKAP7-209ENST00000541650 2008 ntTSL 5 BASIC2.12□□□□□ -2.07
ACTBP60709 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.12□□□□□ -2.07
ACTBP60709 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.11□□□□□ -2.07
ACTBP60709 AC012321.1-201ENST00000561622 1588 ntBASIC2.11□□□□□ -2.07
ACTBP60709 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC2.11□□□□□ -2.07
ACTBP60709 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.11□□□□□ -2.07
ACTBP60709 AC010329.5-201ENST00000623497 2174 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RPL21P132-201ENST00000331267 462 ntBASIC2.11□□□□□ -2.07
ACTBP60709 SNORD62.1-201ENST00000362541 86 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RNU6-859P-201ENST00000362728 107 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RNU6-839P-201ENST00000363347 108 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RNU6-270P-201ENST00000364131 105 ntBASIC2.11□□□□□ -2.07
ACTBP60709 RNU6-650P-201ENST00000365658 111 ntBASIC2.11□□□□□ -2.07
ACTBP60709 AL356057.3-201ENST00000402607 340 ntBASIC2.11□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms