Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC2.69□□□□□ -1.98
PKNOX1P55347 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.69□□□□□ -1.98
PKNOX1P55347 DYNC2H1-202ENST00000375735 13678 ntAPPRIS ALT1 TSL 1 (best) BASIC2.69□□□□□ -1.98
PKNOX1P55347 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
PKNOX1P55347 DEFB108F-201ENST00000344638 222 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 MIR592-201ENST00000384959 97 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 MTND4P13-201ENST00000402078 1023 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.68□□□□□ -1.98
PKNOX1P55347 BX119904.4-201ENST00000424402 301 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC234781.2-201ENST00000426370 994 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 RPS25P9-201ENST00000435591 252 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 MTCO2P20-201ENST00000437339 673 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 SDR42E1P3-201ENST00000438345 502 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 MTND1P31-201ENST00000449206 961 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 BX510359.1-201ENST00000456973 237 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 HMGB1P36-201ENST00000487709 576 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 VN1R104P-201ENST00000505115 1009 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC109445.1-201ENST00000512356 383 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 TBCAP3-201ENST00000512475 312 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.68□□□□□ -1.98
PKNOX1P55347 RN7SKP57-201ENST00000517248 293 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 CASP1P1-201ENST00000526345 212 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 DEFB108D-201ENST00000527787 222 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.68□□□□□ -1.98
PKNOX1P55347 OR6C7P-201ENST00000547875 934 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC125611.2-201ENST00000551907 647 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC090695.1-201ENST00000561269 1222 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.68□□□□□ -1.98
PKNOX1P55347 MIR3921-201ENST00000577308 85 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC2.68□□□□□ -1.98
PKNOX1P55347 AL353997.4-201ENST00000586196 166 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AP001429.1-201ENST00000602568 530 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 BBIP1P1-201ENST00000602999 279 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC106791.2-201ENST00000604680 391 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AL133507.1-201ENST00000605269 557 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC106052.1-201ENST00000608029 497 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC090772.4-201ENST00000623599 362 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
PKNOX1P55347 ATF2-204ENST00000409437 3697 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 ANKAR-209ENST00000520309 4410 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 WDR3-201ENST00000349139 9974 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
PKNOX1P55347 AC099786.3-201ENST00000565735 1410 ntBASIC2.68□□□□□ -1.98
PKNOX1P55347 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC2.68□□□□□ -1.98
PKNOX1P55347 VTRNA1-1-201ENST00000363120 99 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 RNU4-92P-201ENST00000363783 136 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 RNA5SP139-201ENST00000364340 117 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 RNA5SP252-201ENST00000391131 119 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 MIR1290-201ENST00000408735 78 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 MIR1289-1-201ENST00000408836 144 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 CCDC58P2-201ENST00000417131 366 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 MTCYBP38-201ENST00000417160 1123 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AC006333.1-202ENST00000440504 555 ntTSL 4 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AL358232.1-201ENST00000448030 501 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AP000705.1-201ENST00000454567 350 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 SNORD121B-201ENST00000458838 81 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 snoU13.8-201ENST00000458890 104 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 RPL30P9-201ENST00000465586 330 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AIG1P1-201ENST00000503376 148 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 RNU6-826P-201ENST00000516827 104 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC2.67□□□□□ -1.98
PKNOX1P55347 AC103783.1-201ENST00000520506 373 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC2.67□□□□□ -1.98
PKNOX1P55347 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AC011260.1-201ENST00000578420 472 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 GLUD1P4-201ENST00000590914 418 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 BNIP3P39-201ENST00000601077 554 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 SRGNP1-201ENST00000603392 451 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AC006270.3-201ENST00000605967 1036 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AC099566.1-205ENST00000609411 657 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AC069200.1-201ENST00000609511 323 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AC245297.2-201ENST00000610119 565 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 DUXAP10-204ENST00000612052 616 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AC006213.4-201ENST00000616184 634 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 MIR6130-201ENST00000619419 109 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 AC244100.1-202ENST00000621554 382 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 TSGA10-205ENST00000410001 3036 ntAPPRIS P2 TSL 1 (best) BASIC2.67□□□□□ -1.98
PKNOX1P55347 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC2.67□□□□□ -1.98
PKNOX1P55347 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC2.67□□□□□ -1.98
PKNOX1P55347 AC011477.1-204ENST00000623416 1325 ntBASIC2.67□□□□□ -1.98
PKNOX1P55347 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.66□□□□□ -1.98
PKNOX1P55347 MCMDC2-201ENST00000313616 2043 ntTSL 2 BASIC2.66□□□□□ -1.98
PKNOX1P55347 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC2.66□□□□□ -1.98
PKNOX1P55347 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
PKNOX1P55347 SNORD21-201ENST00000383953 95 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 RNU6-76P-201ENST00000384060 104 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 MTCO2P8-201ENST00000412213 658 ntBASIC2.66□□□□□ -1.98
PKNOX1P55347 ZYG11AP1-201ENST00000430329 837 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms