Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH13P55290 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH13P55290 RNU4-21P-201ENST00000362802 126 ntBASIC3.31□□□□□ -1.88
CDH13P55290 RNU5A-8P-201ENST00000364102 114 ntBASIC3.31□□□□□ -1.88
CDH13P55290 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH13P55290 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 MIR493-201ENST00000385254 89 ntBASIC3.31□□□□□ -1.88
CDH13P55290 EI24P2-201ENST00000397776 1076 ntBASIC3.31□□□□□ -1.88
CDH13P55290 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
CDH13P55290 MTCYBP36-201ENST00000404146 440 ntBASIC3.31□□□□□ -1.88
CDH13P55290 CCNG1P1-201ENST00000406783 885 ntBASIC3.31□□□□□ -1.88
CDH13P55290 Y_RNA.608-201ENST00000410647 95 ntBASIC3.31□□□□□ -1.88
CDH13P55290 LINC00397-201ENST00000422074 344 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH13P55290 AC008850.1-201ENST00000427546 362 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 SETP5-201ENST00000437270 562 ntBASIC3.31□□□□□ -1.88
CDH13P55290 RPL22P17-201ENST00000438729 315 ntBASIC3.31□□□□□ -1.88
CDH13P55290 MTCO3P45-201ENST00000443036 613 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH13P55290 AC073387.1-201ENST00000453261 709 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.31□□□□□ -1.88
CDH13P55290 AC108059.3-201ENST00000456388 214 ntBASIC3.31□□□□□ -1.88
CDH13P55290 HMGN1P18-201ENST00000457642 277 ntBASIC3.31□□□□□ -1.88
CDH13P55290 SNORD105B-201ENST00000458770 79 ntBASIC3.31□□□□□ -1.88
CDH13P55290 RPS27P29-201ENST00000463110 252 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AL049714.1-201ENST00000466686 347 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC025518.1-201ENST00000479856 347 ntBASIC3.31□□□□□ -1.88
CDH13P55290 RPS15AP36-201ENST00000492022 382 ntBASIC3.31□□□□□ -1.88
CDH13P55290 OR5BM1P-201ENST00000512021 366 ntBASIC3.31□□□□□ -1.88
CDH13P55290 MTND4LP31-201ENST00000514859 294 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH13P55290 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.31□□□□□ -1.88
CDH13P55290 OR4H12P-201ENST00000556269 907 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.31□□□□□ -1.88
CDH13P55290 AL356432.3-201ENST00000568952 465 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC012065.4-201ENST00000602445 679 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AL606834.2-201ENST00000602954 668 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC138749.5-201ENST00000611461 208 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC027807.2-201ENST00000616099 408 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC116165.2-201ENST00000616705 206 ntBASIC3.31□□□□□ -1.88
CDH13P55290 AC104010.1-201ENST00000616889 150 ntBASIC3.31□□□□□ -1.88
CDH13P55290 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CDH13P55290 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CDH13P55290 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH13P55290 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH13P55290 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH13P55290 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH13P55290 CUL1P1-201ENST00000509510 2425 ntBASIC3.3□□□□□ -1.88
CDH13P55290 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDH13P55290 RNA5SP124-201ENST00000362739 110 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AL359837.1-201ENST00000381357 287 ntBASIC3.3□□□□□ -1.88
CDH13P55290 SNORA26.8-201ENST00000391306 124 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC110754.1-201ENST00000399740 601 ntBASIC3.3□□□□□ -1.88
CDH13P55290 TXNP7-201ENST00000406296 293 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC093578.1-201ENST00000415219 368 ntBASIC3.3□□□□□ -1.88
CDH13P55290 UBE2FP1-201ENST00000416536 447 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH13P55290 CYCSP46-201ENST00000423569 204 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 ATP5JP1-201ENST00000431631 322 ntBASIC3.3□□□□□ -1.88
CDH13P55290 SNRPEP4-201ENST00000435815 279 ntBASIC3.3□□□□□ -1.88
CDH13P55290 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH13P55290 RPL23AP22-201ENST00000437556 453 ntBASIC3.3□□□□□ -1.88
CDH13P55290 COX6CP12-201ENST00000446748 202 ntBASIC3.3□□□□□ -1.88
CDH13P55290 ELOCP30-201ENST00000447108 299 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AL590365.1-201ENST00000450788 243 ntBASIC3.3□□□□□ -1.88
CDH13P55290 SSXP4-201ENST00000451349 245 ntBASIC3.3□□□□□ -1.88
CDH13P55290 RPS27AP8-201ENST00000452665 445 ntBASIC3.3□□□□□ -1.88
CDH13P55290 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH13P55290 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC3.3□□□□□ -1.88
CDH13P55290 GMPSP1-201ENST00000514075 579 ntBASIC3.3□□□□□ -1.88
CDH13P55290 FABP5P5-201ENST00000515537 406 ntBASIC3.3□□□□□ -1.88
CDH13P55290 RNU1-95P-201ENST00000516357 160 ntBASIC3.3□□□□□ -1.88
CDH13P55290 SCARNA15.2-201ENST00000516409 127 ntBASIC3.3□□□□□ -1.88
CDH13P55290 RNU1-128P-201ENST00000516704 160 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC100870.1-201ENST00000522035 505 ntBASIC3.3□□□□□ -1.88
CDH13P55290 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH13P55290 MTCO1P49-201ENST00000523429 802 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC004024.1-201ENST00000549244 247 ntBASIC3.3□□□□□ -1.88
CDH13P55290 ZNF519P3-201ENST00000557158 1032 ntBASIC3.3□□□□□ -1.88
CDH13P55290 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH13P55290 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.3□□□□□ -1.88
CDH13P55290 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.3□□□□□ -1.88
CDH13P55290 AL590229.1-201ENST00000603497 542 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC009570.1-201ENST00000609599 745 ntBASIC3.3□□□□□ -1.88
CDH13P55290 AC103710.1-201ENST00000610003 901 ntBASIC3.3□□□□□ -1.88
CDH13P55290 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.3□□□□□ -1.88
CDH13P55290 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.3□□□□□ -1.88
CDH13P55290 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
CDH13P55290 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CDH13P55290 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CDH13P55290 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 111.9 ms