Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 RNU6-1129P-201ENST00000515964 104 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 RNU1-41P-201ENST00000516161 162 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 RNU1-48P-201ENST00000516400 162 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 SNORA31.20-201ENST00000517111 133 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 OR5AK1P-201ENST00000524837 922 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 UBTFL10-201ENST00000528532 562 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC009712.1-201ENST00000564938 316 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.11□□□□□ -1.91
HMGCS2P54868 VN1R82P-201ENST00000601481 356 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 CLIC4P2-201ENST00000601934 717 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC079089.3-201ENST00000603094 673 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC006254.3-201ENST00000603353 884 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AC092628.2-201ENST00000622492 339 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC007490.1-201ENST00000624321 703 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AC097655.1-201ENST00000635075 318 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 U6.101-201ENST00000637707 76 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 GABRG2-229ENST00000641017 3628 ntBASIC3.11□□□□□ -1.91
HMGCS2P54868 NF1-214ENST00000490416 1329 ntTSL 3 BASIC3.11□□□□□ -1.91
HMGCS2P54868 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
HMGCS2P54868 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
HMGCS2P54868 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.11□□□□□ -1.91
HMGCS2P54868 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS2P54868 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC005539.1-201ENST00000443768 1479 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 EI24P2-201ENST00000397776 1076 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AL024474.1-201ENST00000404655 591 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AL583834.1-201ENST00000406943 343 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 MIR1284-201ENST00000408337 120 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 PIGPP2-201ENST00000411569 458 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL035410.1-201ENST00000427409 427 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AL121890.1-201ENST00000435457 205 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS2P54868 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS2P54868 OR5H5P-201ENST00000503164 928 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC147055.4-201ENST00000504399 745 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC006499.2-201ENST00000513470 337 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 SNORA3.4-201ENST00000515969 96 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 RNU1-61P-201ENST00000516107 151 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AP003461.1-201ENST00000528866 78 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC008127.2-201ENST00000549925 1075 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL512347.1-201ENST00000566420 503 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 MIR4474-201ENST00000579189 78 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 MIR4999-201ENST00000585029 91 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL031281.1-201ENST00000604049 488 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC025588.3-201ENST00000604182 274 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC008277.2-201ENST00000605196 797 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC112220.3-201ENST00000605502 502 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC245297.2-201ENST00000610119 565 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 VIS1.1-201ENST00000610517 203 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AL020991.1-201ENST00000612314 373 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC090116.1-201ENST00000615679 446 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 KLRF1-207ENST00000617793 1096 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 AC009318.4-201ENST00000620496 486 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 AC010338.1-201ENST00000621823 717 ntBASIC3.1□□□□□ -1.91
HMGCS2P54868 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HMGCS2P54868 AL390862.1-201ENST00000635467 1469 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HMGCS2P54868 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
HMGCS2P54868 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGCS2P54868 AL391994.1-201ENST00000254724 282 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HMGCS2P54868 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HMGCS2P54868 RNU6-931P-201ENST00000363850 107 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 SNORA70B-201ENST00000384210 135 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RNU4-65P-201ENST00000410473 140 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RAP1BP1-201ENST00000412709 553 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 RAD23BP2-201ENST00000416003 1207 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HMGCS2P54868 FNDC3CP-201ENST00000420795 1155 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGCS2P54868 YWHAZP7-201ENST00000436906 631 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.09□□□□□ -1.91
HMGCS2P54868 AC125238.1-201ENST00000448842 249 ntBASIC3.09□□□□□ -1.91
HMGCS2P54868 SSXP4-201ENST00000451349 245 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 135.9 ms