Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AC022447.1-201ENST00000515358 464 ntBASIC3.3□□□□□ -1.88
PDX1P52945 FABP5P5-201ENST00000515537 406 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC3.3□□□□□ -1.88
PDX1P52945 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 MIR5004-201ENST00000579078 107 ntBASIC3.3□□□□□ -1.88
PDX1P52945 NBR2-204ENST00000587322 63 ntBASIC3.3□□□□□ -1.88
PDX1P52945 TPMTP1-201ENST00000592307 737 ntBASIC3.3□□□□□ -1.88
PDX1P52945 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 AL158211.4-201ENST00000606988 584 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AL391813.2-201ENST00000609113 322 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AL355472.4-201ENST00000610233 626 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AL590282.1-201ENST00000610379 1136 ntBASIC3.3□□□□□ -1.88
PDX1P52945 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3.3□□□□□ -1.88
PDX1P52945 AC112204.3-201ENST00000623822 332 ntBASIC3.3□□□□□ -1.88
PDX1P52945 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.3□□□□□ -1.88
PDX1P52945 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDX1P52945 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 AC011460.1-201ENST00000636268 1834 ntBASIC3.3□□□□□ -1.88
PDX1P52945 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
PDX1P52945 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.3□□□□□ -1.88
PDX1P52945 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
PDX1P52945 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDX1P52945 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDX1P52945 FGF7P2-201ENST00000332473 296 ntBASIC3.29□□□□□ -1.88
PDX1P52945 SNORA31-201ENST00000362607 130 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RNU6-1078P-201ENST00000364522 103 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RNA5SP189-201ENST00000364920 115 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RNY3P10-201ENST00000384764 102 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.29□□□□□ -1.88
PDX1P52945 USP9YP13-201ENST00000417797 480 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.29□□□□□ -1.88
PDX1P52945 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC010153.1-201ENST00000432862 727 ntBASIC3.29□□□□□ -1.88
PDX1P52945 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.29□□□□□ -1.88
PDX1P52945 AL022238.1-201ENST00000442557 355 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RAC1P7-201ENST00000445367 377 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AL671855.1-201ENST00000446875 1203 ntBASIC3.29□□□□□ -1.88
PDX1P52945 MTND1P29-201ENST00000448112 647 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.29□□□□□ -1.88
PDX1P52945 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.29□□□□□ -1.88
PDX1P52945 AP1S2P1-201ENST00000457344 379 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AP001486.1-201ENST00000463339 476 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC023598.1-201ENST00000472521 361 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RPL31P13-201ENST00000484151 370 ntBASIC3.29□□□□□ -1.88
PDX1P52945 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.29□□□□□ -1.88
PDX1P52945 AC020893.1-201ENST00000502452 580 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC010424.1-201ENST00000506336 297 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC004062.1-201ENST00000509926 645 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC3.29□□□□□ -1.88
PDX1P52945 NDUFB4P9-201ENST00000511646 388 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC023141.12-201ENST00000512399 199 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RNU6-798P-201ENST00000516912 103 ntBASIC3.29□□□□□ -1.88
PDX1P52945 RNU6-1003P-201ENST00000517099 105 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC3.29□□□□□ -1.88
PDX1P52945 C11orf1-204ENST00000530214 599 ntTSL 5 BASIC3.29□□□□□ -1.88
PDX1P52945 OR5D17P-201ENST00000531492 978 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.29□□□□□ -1.88
PDX1P52945 MIR4276-201ENST00000584832 70 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC067852.3-201ENST00000589177 561 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC119751.7-201ENST00000600494 245 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC073544.2-201ENST00000601155 540 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AL022099.1-201ENST00000604551 712 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC068276.1-201ENST00000605793 379 ntBASIC3.29□□□□□ -1.88
PDX1P52945 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC3.29□□□□□ -1.88
PDX1P52945 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.29□□□□□ -1.88
PDX1P52945 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AL360181.4-201ENST00000621752 134 ntBASIC3.29□□□□□ -1.88
PDX1P52945 AC099654.13-201ENST00000639774 207 ntBASIC3.29□□□□□ -1.88
PDX1P52945 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDX1P52945 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
PDX1P52945 AL353743.1-202ENST00000431724 1695 ntBASIC3.29□□□□□ -1.88
PDX1P52945 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
PDX1P52945 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
PDX1P52945 AC066616.2-201ENST00000559334 1481 ntBASIC3.28□□□□□ -1.88
PDX1P52945 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 MFSD8-233ENST00000641482 4860 ntBASIC3.28□□□□□ -1.88
PDX1P52945 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PDX1P52945 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 AL357075.1-201ENST00000404107 726 ntBASIC3.28□□□□□ -1.88
PDX1P52945 RNU2-43P-201ENST00000410306 190 ntBASIC3.28□□□□□ -1.88
PDX1P52945 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 BTF3L4P1-201ENST00000413813 468 ntBASIC3.28□□□□□ -1.88
PDX1P52945 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.28□□□□□ -1.88
PDX1P52945 AL162734.1-201ENST00000432858 157 ntTSL 5 BASIC3.28□□□□□ -1.88
PDX1P52945 AL445490.2-201ENST00000440492 441 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 AL049734.2-201ENST00000441066 616 ntBASIC3.28□□□□□ -1.88
PDX1P52945 KATNBL1P3-201ENST00000443475 909 ntBASIC3.28□□□□□ -1.88
PDX1P52945 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC3.28□□□□□ -1.88
PDX1P52945 USP9YP12-201ENST00000450481 570 ntBASIC3.28□□□□□ -1.88
PDX1P52945 RPL9P32-201ENST00000464118 620 ntBASIC3.28□□□□□ -1.88
PDX1P52945 MTCO3P28-201ENST00000513351 515 ntBASIC3.28□□□□□ -1.88
PDX1P52945 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.28□□□□□ -1.88
PDX1P52945 AP004242.1-201ENST00000533701 349 ntBASIC3.28□□□□□ -1.88
PDX1P52945 AL133271.1-201ENST00000538229 291 ntBASIC3.28□□□□□ -1.88
PDX1P52945 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.28□□□□□ -1.88
PDX1P52945 AC026333.2-201ENST00000542164 106 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms