Protein–RNA interactions for Protein: P51654

GPC3, Glypican-3, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3P51654 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.17□□□□□ -1.9
GPC3P51654 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
GPC3P51654 NIPA2P5-201ENST00000452282 464 ntBASIC3.17□□□□□ -1.9
GPC3P51654 RNU6-420P-201ENST00000458780 107 ntBASIC3.17□□□□□ -1.9
GPC3P51654 AC147055.4-201ENST00000504399 745 ntBASIC3.17□□□□□ -1.9
GPC3P51654 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.17□□□□□ -1.9
GPC3P51654 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC3.17□□□□□ -1.9
GPC3P51654 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC3.17□□□□□ -1.9
GPC3P51654 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC3.17□□□□□ -1.9
GPC3P51654 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.17□□□□□ -1.9
GPC3P51654 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.17□□□□□ -1.9
GPC3P51654 U73023.1-201ENST00000603134 700 ntBASIC3.17□□□□□ -1.9
GPC3P51654 AL390208.1-201ENST00000605885 644 ntBASIC3.17□□□□□ -1.9
GPC3P51654 AC131902.3-201ENST00000611767 581 ntBASIC3.17□□□□□ -1.9
GPC3P51654 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
GPC3P51654 AL590099.1-201ENST00000615276 138 ntBASIC3.17□□□□□ -1.9
GPC3P51654 AL450472.3-201ENST00000615578 367 ntBASIC3.17□□□□□ -1.9
GPC3P51654 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.17□□□□□ -1.9
GPC3P51654 AL159972.1-201ENST00000625150 448 ntBASIC3.17□□□□□ -1.9
GPC3P51654 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.17□□□□□ -1.9
GPC3P51654 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
GPC3P51654 AC093010.3-201ENST00000570269 15214 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AP000526.1-201ENST00000603308 1388 ntBASIC3.16□□□□□ -1.9
GPC3P51654 GABRG2-229ENST00000641017 3628 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AC106754.1-201ENST00000562632 1513 ntBASIC3.16□□□□□ -1.9
GPC3P51654 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
GPC3P51654 SNORD116-12-201ENST00000384468 92 ntBASIC3.16□□□□□ -1.9
GPC3P51654 RN7SKP58-201ENST00000411010 305 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AL449283.1-202ENST00000418249 604 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC3.16□□□□□ -1.9
GPC3P51654 USP9YP24-201ENST00000434374 697 ntBASIC3.16□□□□□ -1.9
GPC3P51654 RPS20P5-201ENST00000434808 360 ntBASIC3.16□□□□□ -1.9
GPC3P51654 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.16□□□□□ -1.9
GPC3P51654 ZNF736P11Y-201ENST00000442535 1213 ntBASIC3.16□□□□□ -1.9
GPC3P51654 ZNF736P12Y-201ENST00000443152 1243 ntBASIC3.16□□□□□ -1.9
GPC3P51654 USP9YP17-201ENST00000444617 696 ntBASIC3.16□□□□□ -1.9
GPC3P51654 EXOSC3P1-201ENST00000448649 500 ntBASIC3.16□□□□□ -1.9
GPC3P51654 TRGVB-201ENST00000453257 471 ntBASIC3.16□□□□□ -1.9
GPC3P51654 MTND2P24-201ENST00000453434 806 ntBASIC3.16□□□□□ -1.9
GPC3P51654 OFD1P7Y-201ENST00000454643 1155 ntBASIC3.16□□□□□ -1.9
GPC3P51654 ZNF736P4Y-201ENST00000454995 1243 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AL590639.1-201ENST00000456484 337 ntBASIC3.16□□□□□ -1.9
GPC3P51654 RPL21P41-201ENST00000459863 264 ntBASIC3.16□□□□□ -1.9
GPC3P51654 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GPC3P51654 HSPE1P6-201ENST00000479457 291 ntBASIC3.16□□□□□ -1.9
GPC3P51654 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC3P51654 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC3P51654 UBE2V1P12-201ENST00000503954 474 ntBASIC3.16□□□□□ -1.9
GPC3P51654 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.16□□□□□ -1.9
GPC3P51654 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC3P51654 AC017037.2-201ENST00000513850 890 ntBASIC3.16□□□□□ -1.9
GPC3P51654 RN7SKP31-201ENST00000516354 278 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC3P51654 AC079600.2-201ENST00000550076 130 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.16□□□□□ -1.9
GPC3P51654 AC079411.1-201ENST00000565441 795 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GPC3P51654 ACTR3BP3-201ENST00000565577 979 ntBASIC3.16□□□□□ -1.9
GPC3P51654 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.16□□□□□ -1.9
GPC3P51654 MIR4672-201ENST00000583126 81 ntBASIC3.16□□□□□ -1.9
GPC3P51654 VN1R78P-201ENST00000597393 564 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AC006023.1-201ENST00000603944 259 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AL121895.2-201ENST00000619558 447 ntBASIC3.16□□□□□ -1.9
GPC3P51654 AC007998.5-201ENST00000622938 237 ntBASIC3.16□□□□□ -1.9
GPC3P51654 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
GPC3P51654 AL079343.1-201ENST00000572358 1771 ntBASIC3.15□□□□□ -1.9
GPC3P51654 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.15□□□□□ -1.9
GPC3P51654 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.15□□□□□ -1.9
GPC3P51654 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
GPC3P51654 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC3P51654 SNORA72.3-201ENST00000365074 132 ntBASIC3.15□□□□□ -1.91
GPC3P51654 CUBN-201ENST00000377823 705 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC3P51654 RNU6-198P-201ENST00000384258 104 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AL136310.1-201ENST00000404926 654 ntBASIC3.15□□□□□ -1.91
GPC3P51654 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC3P51654 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC3P51654 AC013410.2-201ENST00000422627 201 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC087499.2-201ENST00000432861 149 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC090774.1-201ENST00000435925 246 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC112653.1-201ENST00000443851 386 ntBASIC3.15□□□□□ -1.91
GPC3P51654 MTCO2P25-201ENST00000447065 681 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC007327.1-201ENST00000447461 264 ntBASIC3.15□□□□□ -1.91
GPC3P51654 MTND4LP3-201ENST00000468320 276 ntBASIC3.15□□□□□ -1.91
GPC3P51654 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
GPC3P51654 AP004217.1-201ENST00000480579 346 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC3P51654 RAC1P5-201ENST00000512182 576 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC3.15□□□□□ -1.91
GPC3P51654 COX6CP8-201ENST00000522620 226 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.15□□□□□ -1.91
GPC3P51654 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.15□□□□□ -1.91
GPC3P51654 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC138761.3-201ENST00000579993 334 ntBASIC3.15□□□□□ -1.91
GPC3P51654 VN1R90P-201ENST00000595717 726 ntBASIC3.15□□□□□ -1.91
GPC3P51654 BNIP3P40-201ENST00000596017 556 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AP001429.1-201ENST00000602568 530 ntBASIC3.15□□□□□ -1.91
GPC3P51654 RPL12P50-201ENST00000603116 116 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AL133507.1-201ENST00000605269 557 ntBASIC3.15□□□□□ -1.91
GPC3P51654 ATP1B3P1-201ENST00000605365 821 ntBASIC3.15□□□□□ -1.91
GPC3P51654 AC004852.3-201ENST00000614131 326 ntBASIC3.15□□□□□ -1.91
GPC3P51654 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 107.9 ms