Protein–RNA interactions for Protein: P49959

MRE11, Double-strand break repair protein MRE11, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11P49959 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC4.76□□□□□ -1.65
MRE11P49959 AC019097.1-201ENST00000424783 735 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AC096632.1-201ENST00000427395 310 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AL645939.1-201ENST00000453429 797 ntBASIC4.76□□□□□ -1.65
MRE11P49959 TRBV26-201ENST00000456572 344 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC4.76□□□□□ -1.65
MRE11P49959 NAF1-205ENST00000509434 385 ntTSL 3 BASIC4.76□□□□□ -1.65
MRE11P49959 AC021146.1-201ENST00000511202 716 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AC010486.1-201ENST00000511793 424 ntBASIC4.76□□□□□ -1.65
MRE11P49959 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.76□□□□□ -1.65
MRE11P49959 Y_RNA.675-201ENST00000516389 149 ntBASIC4.76□□□□□ -1.65
MRE11P49959 RNU6-835P-201ENST00000516974 104 ntBASIC4.76□□□□□ -1.65
MRE11P49959 DEUP1-203ENST00000527307 767 ntTSL 3 BASIC4.76□□□□□ -1.65
MRE11P49959 AC125611.2-201ENST00000551907 647 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.76□□□□□ -1.65
MRE11P49959 AC034105.3-201ENST00000565294 442 ntBASIC4.76□□□□□ -1.65
MRE11P49959 MIR3118-1-201ENST00000581787 76 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AL353997.4-201ENST00000586196 166 ntBASIC4.76□□□□□ -1.65
MRE11P49959 AC135507.2-201ENST00000612443 309 ntBASIC4.76□□□□□ -1.65
MRE11P49959 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MRE11P49959 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
MRE11P49959 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MRE11P49959 AC112484.5-201ENST00000624189 228 ntBASIC4.76□□□□□ -1.65
MRE11P49959 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.76□□□□□ -1.65
MRE11P49959 SRP54-214ENST00000630962 162 ntTSL 5 BASIC4.76□□□□□ -1.65
MRE11P49959 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
MRE11P49959 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
MRE11P49959 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC4.76□□□□□ -1.65
MRE11P49959 ETV1-203ENST00000403527 3363 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
MRE11P49959 AC092125.1-201ENST00000562568 1995 ntBASIC4.75□□□□□ -1.65
MRE11P49959 FRG1BP-201ENST00000278882 761 ntBASIC4.75□□□□□ -1.65
MRE11P49959 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MRE11P49959 RNU4-1-201ENST00000363925 141 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
MRE11P49959 RNU6-456P-201ENST00000384493 107 ntBASIC4.75□□□□□ -1.65
MRE11P49959 MIR218-2-201ENST00000385006 110 ntBASIC4.75□□□□□ -1.65
MRE11P49959 MIR3065-201ENST00000390137 79 ntBASIC4.75□□□□□ -1.65
MRE11P49959 OR9R1P-201ENST00000412200 877 ntBASIC4.75□□□□□ -1.65
MRE11P49959 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.75□□□□□ -1.65
MRE11P49959 MTCO2P5-201ENST00000422621 426 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 HSPE1P28-201ENST00000443139 211 ntBASIC4.75□□□□□ -1.65
MRE11P49959 RPS26P56-201ENST00000444468 240 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AL500522.2-201ENST00000448562 343 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC005297.2-201ENST00000450430 606 ntBASIC4.75□□□□□ -1.65
MRE11P49959 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC4.75□□□□□ -1.65
MRE11P49959 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 RPL21P126-201ENST00000470049 478 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AC010587.1-201ENST00000505809 469 ntBASIC4.75□□□□□ -1.65
MRE11P49959 SCARNA15.1-201ENST00000516384 125 ntBASIC4.75□□□□□ -1.65
MRE11P49959 RNU1-103P-201ENST00000516502 125 ntBASIC4.75□□□□□ -1.65
MRE11P49959 IGKV2D-23-201ENST00000518179 286 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.75□□□□□ -1.65
MRE11P49959 AC007424.1-203ENST00000554613 687 ntBASIC4.75□□□□□ -1.65
MRE11P49959 MIR4795-201ENST00000584182 89 ntBASIC4.75□□□□□ -1.65
MRE11P49959 SNORA51-201ENST00000606420 132 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AL021997.2-201ENST00000615674 271 ntBASIC4.75□□□□□ -1.65
MRE11P49959 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC4.75□□□□□ -1.65
MRE11P49959 AC099669.2-201ENST00000616549 437 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC004825.2-201ENST00000616634 455 ntBASIC4.75□□□□□ -1.65
MRE11P49959 MIR6875-201ENST00000617506 72 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC112204.3-201ENST00000623822 332 ntBASIC4.75□□□□□ -1.65
MRE11P49959 AC091953.2-201ENST00000623979 160 ntBASIC4.75□□□□□ -1.65
MRE11P49959 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
MRE11P49959 MT-ND4-201ENST00000361381 1378 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MRE11P49959 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
MRE11P49959 CKAP2P1-201ENST00000555477 2049 ntBASIC4.75□□□□□ -1.65
MRE11P49959 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.75□□□□□ -1.65
MRE11P49959 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.75□□□□□ -1.65
MRE11P49959 RNU6-767P-201ENST00000384132 107 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 MRPL50P2-201ENST00000416821 482 ntBASIC4.74□□□□□ -1.65
MRE11P49959 RPL23AP38-201ENST00000423801 469 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 AC011998.1-201ENST00000433403 117 ntBASIC4.74□□□□□ -1.65
MRE11P49959 RPS29P7-201ENST00000439662 171 ntBASIC4.74□□□□□ -1.65
MRE11P49959 USP9YP15-201ENST00000442391 422 ntBASIC4.74□□□□□ -1.65
MRE11P49959 RPL21P89-201ENST00000444021 467 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC007677.1-201ENST00000445757 515 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 LINC01758-201ENST00000448001 458 ntTSL 3 BASIC4.74□□□□□ -1.65
MRE11P49959 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC4.74□□□□□ -1.65
MRE11P49959 RPL30P11-201ENST00000495304 339 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.74□□□□□ -1.65
MRE11P49959 MTCO3P9-201ENST00000506989 781 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.74□□□□□ -1.65
MRE11P49959 FGF7P4-201ENST00000509595 295 ntBASIC4.74□□□□□ -1.65
MRE11P49959 Y_RNA.701-201ENST00000516812 110 ntBASIC4.74□□□□□ -1.65
MRE11P49959 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.74□□□□□ -1.65
MRE11P49959 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC4.74□□□□□ -1.65
MRE11P49959 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
MRE11P49959 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.74□□□□□ -1.65
MRE11P49959 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC4.74□□□□□ -1.65
MRE11P49959 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC4.74□□□□□ -1.65
MRE11P49959 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 104.9 ms