Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK1P49759 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.41□□□□□ -1.86
CLK1P49759 AC090774.1-201ENST00000435925 246 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC3.41□□□□□ -1.86
CLK1P49759 USP9YP29-201ENST00000445112 563 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL357140.2-201ENST00000445884 440 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK1P49759 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.41□□□□□ -1.86
CLK1P49759 MRPS31P2-201ENST00000451581 518 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RPL23AP35-201ENST00000451906 501 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RPL18AP17-201ENST00000455326 198 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RPL30P9-201ENST00000465586 330 ntBASIC3.41□□□□□ -1.86
CLK1P49759 RPS15AP17-201ENST00000470598 390 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC011825.1-201ENST00000484967 388 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.41□□□□□ -1.86
CLK1P49759 AC023424.2-201ENST00000493479 777 ntBASIC3.41□□□□□ -1.86
CLK1P49759 HMGB1P28-201ENST00000507778 552 ntBASIC3.41□□□□□ -1.86
CLK1P49759 POU5F1P7-201ENST00000508759 541 ntBASIC3.41□□□□□ -1.86
CLK1P49759 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.41□□□□□ -1.86
CLK1P49759 GMPSP1-201ENST00000514075 579 ntBASIC3.41□□□□□ -1.86
CLK1P49759 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC3.41□□□□□ -1.86
CLK1P49759 OR5G4P-201ENST00000525251 760 ntBASIC3.41□□□□□ -1.86
CLK1P49759 CASP1P1-201ENST00000526345 212 ntBASIC3.41□□□□□ -1.86
CLK1P49759 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.41□□□□□ -1.86
CLK1P49759 HSPE1P3-201ENST00000559254 309 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.41□□□□□ -1.86
CLK1P49759 AL512347.1-201ENST00000566420 503 ntBASIC3.41□□□□□ -1.86
CLK1P49759 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.41□□□□□ -1.86
CLK1P49759 MIR4637-201ENST00000582405 84 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC107304.1-201ENST00000604229 296 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL139286.2-201ENST00000606838 396 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC239868.4-201ENST00000608318 671 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC131902.3-201ENST00000611767 581 ntBASIC3.41□□□□□ -1.86
CLK1P49759 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.41□□□□□ -1.86
CLK1P49759 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC025588.4-201ENST00000615802 908 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC099842.1-201ENST00000619919 596 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AL356266.1-201ENST00000623311 483 ntBASIC3.41□□□□□ -1.86
CLK1P49759 AC110079.1-202ENST00000635213 138 ntBASIC3.41□□□□□ -1.86
CLK1P49759 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLK1P49759 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLK1P49759 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC3.41□□□□□ -1.86
CLK1P49759 CREBRF-201ENST00000296953 7778 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
CLK1P49759 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
CLK1P49759 SNHG14-215ENST00000551631 4008 ntTSL 5 BASIC3.41□□□□□ -1.86
CLK1P49759 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
CLK1P49759 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
CLK1P49759 RNU6-216P-201ENST00000363282 104 ntBASIC3.4□□□□□ -1.87
CLK1P49759 Y_RNA.359-201ENST00000365498 102 ntBASIC3.4□□□□□ -1.87
CLK1P49759 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 RNU6-1119P-201ENST00000384349 108 ntBASIC3.4□□□□□ -1.87
CLK1P49759 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.4□□□□□ -1.87
CLK1P49759 AL513477.1-202ENST00000417061 214 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AL139247.1-201ENST00000422768 325 ntBASIC3.4□□□□□ -1.87
CLK1P49759 MTND2P20-201ENST00000440805 661 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC009237.8-201ENST00000445492 379 ntBASIC3.4□□□□□ -1.87
CLK1P49759 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC3.4□□□□□ -1.87
CLK1P49759 CYCSP35-201ENST00000451978 304 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AL590639.1-201ENST00000456484 337 ntBASIC3.4□□□□□ -1.87
CLK1P49759 TPT1P7-201ENST00000458300 517 ntBASIC3.4□□□□□ -1.87
CLK1P49759 RPL7P23-201ENST00000493874 747 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC093663.1-201ENST00000497190 394 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.4□□□□□ -1.87
CLK1P49759 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.4□□□□□ -1.87
CLK1P49759 RNA5SP380-201ENST00000517190 98 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 HSPA8P13-201ENST00000523715 472 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.4□□□□□ -1.87
CLK1P49759 GTF2IP22-201ENST00000554443 182 ntBASIC3.4□□□□□ -1.87
CLK1P49759 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 EIF1P4-201ENST00000572664 335 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 OR4K8P-201ENST00000578842 1048 ntBASIC3.4□□□□□ -1.87
CLK1P49759 MIR5685-201ENST00000579080 79 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.4□□□□□ -1.87
CLK1P49759 AC010620.2-201ENST00000600135 313 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC087752.4-201ENST00000605911 462 ntBASIC3.4□□□□□ -1.87
CLK1P49759 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 AC010678.1-201ENST00000614118 713 ntBASIC3.4□□□□□ -1.87
CLK1P49759 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 FP236240.3-201ENST00000623061 327 ntBASIC3.4□□□□□ -1.87
CLK1P49759 AC006927.3-201ENST00000638789 384 ntBASIC3.4□□□□□ -1.87
CLK1P49759 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.4□□□□□ -1.87
CLK1P49759 AC010680.1-201ENST00000590024 3590 ntBASIC3.4□□□□□ -1.87
CLK1P49759 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
CLK1P49759 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.39□□□□□ -1.87
CLK1P49759 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.39□□□□□ -1.87
CLK1P49759 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK1P49759 OR6C2-201ENST00000322678 939 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
CLK1P49759 RPL21P132-201ENST00000331267 462 ntBASIC3.39□□□□□ -1.87
CLK1P49759 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLK1P49759 Y_RNA.3-201ENST00000362331 103 ntBASIC3.39□□□□□ -1.87
CLK1P49759 MIR30B-201ENST00000384850 88 ntBASIC3.39□□□□□ -1.87
CLK1P49759 AC007066.1-201ENST00000392902 381 ntBASIC3.39□□□□□ -1.87
CLK1P49759 RPL21P17-201ENST00000397467 475 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 94.2 ms