Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 RNU1-14P-201ENST00000362759 152 ntBASIC3.6□□□□□ -1.83
SOX2P48431 RNU6-179P-201ENST00000363350 107 ntBASIC3.6□□□□□ -1.83
SOX2P48431 RNU6-960P-201ENST00000364056 120 ntBASIC3.6□□□□□ -1.83
SOX2P48431 RNA5SP513-201ENST00000364648 118 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 RNU6-1074P-201ENST00000383995 104 ntBASIC3.6□□□□□ -1.83
SOX2P48431 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SOX2P48431 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SOX2P48431 FAR2P2-201ENST00000413041 594 ntBASIC3.6□□□□□ -1.83
SOX2P48431 RPL7AP73-201ENST00000413490 353 ntBASIC3.6□□□□□ -1.83
SOX2P48431 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AL356387.2-201ENST00000422272 243 ntBASIC3.6□□□□□ -1.83
SOX2P48431 PPP1R11P2-201ENST00000423543 382 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL513185.2-201ENST00000425543 193 ntBASIC3.6□□□□□ -1.83
SOX2P48431 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AL138759.1-201ENST00000432120 645 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AL158209.1-201ENST00000433460 439 ntTSL 3 BASIC3.6□□□□□ -1.83
SOX2P48431 RPL23AP46-201ENST00000438548 490 ntBASIC3.6□□□□□ -1.83
SOX2P48431 SNRPEP8-201ENST00000442866 260 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.6□□□□□ -1.83
SOX2P48431 RPS20P20-201ENST00000460498 340 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC109327.1-201ENST00000471666 403 ntBASIC3.6□□□□□ -1.83
SOX2P48431 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 RN7SL432P-201ENST00000484057 298 ntBASIC3.6□□□□□ -1.83
SOX2P48431 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 AC108475.1-201ENST00000507880 950 ntBASIC3.6□□□□□ -1.83
SOX2P48431 RNA5SP73-201ENST00000516744 108 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AP004371.1-201ENST00000525240 214 ntBASIC3.6□□□□□ -1.83
SOX2P48431 CENPUP1-201ENST00000526649 1202 ntBASIC3.6□□□□□ -1.83
SOX2P48431 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.6□□□□□ -1.83
SOX2P48431 BNIP3P5-201ENST00000562290 498 ntBASIC3.6□□□□□ -1.83
SOX2P48431 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AC098848.1-201ENST00000588466 567 ntTSL 4 BASIC3.6□□□□□ -1.83
SOX2P48431 LINC01533-202ENST00000588694 632 ntTSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.6-201ENST00000603753 252 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.11-201ENST00000604059 253 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL022099.1-201ENST00000604551 712 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC008162.1-201ENST00000604718 254 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.1-201ENST00000604752 252 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.5-201ENST00000605253 252 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.12-201ENST00000605291 253 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.8-201ENST00000605353 252 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AL670379.7-201ENST00000605823 252 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC008945.2-201ENST00000606056 604 ntBASIC3.6□□□□□ -1.83
SOX2P48431 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.6□□□□□ -1.83
SOX2P48431 AC104260.1-201ENST00000616660 539 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC006504.8-201ENST00000621046 635 ntBASIC3.6□□□□□ -1.83
SOX2P48431 AC110801.1-201ENST00000623590 212 ntBASIC3.6□□□□□ -1.83
SOX2P48431 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC3.6□□□□□ -1.83
SOX2P48431 API5-210ENST00000534600 1760 ntTSL 5 BASIC3.6□□□□□ -1.83
SOX2P48431 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.6□□□□□ -1.83
SOX2P48431 TAOK3-202ENST00000419821 4301 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
SOX2P48431 BDP1P-201ENST00000582658 1990 ntBASIC3.6□□□□□ -1.83
SOX2P48431 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX2P48431 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX2P48431 ORMDL1-201ENST00000325795 2692 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SOX2P48431 AL158163.1-201ENST00000603915 1649 ntBASIC3.59□□□□□ -1.83
SOX2P48431 CNOT2-231ENST00000551483 4753 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SOX2P48431 RPL7P26-201ENST00000333817 754 ntBASIC3.59□□□□□ -1.83
SOX2P48431 SNORD35B-201ENST00000363660 87 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RNU6-188P-201ENST00000364207 107 ntBASIC3.59□□□□□ -1.83
SOX2P48431 SNORD37.1-201ENST00000390968 65 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AL136116.1-201ENST00000403591 381 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AL359634.1-202ENST00000404721 284 ntBASIC3.59□□□□□ -1.83
SOX2P48431 TXNP7-201ENST00000406296 293 ntBASIC3.59□□□□□ -1.83
SOX2P48431 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 AC119751.6-201ENST00000416712 186 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 MTCYBP8-201ENST00000422855 651 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RAC1P6-201ENST00000423911 575 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC011742.1-201ENST00000431448 434 ntBASIC3.59□□□□□ -1.83
SOX2P48431 USP9YP8-201ENST00000441913 500 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC073415.1-201ENST00000449240 153 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RPS11P1-201ENST00000451072 473 ntBASIC3.59□□□□□ -1.83
SOX2P48431 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.59□□□□□ -1.83
SOX2P48431 RPS29P15-201ENST00000458329 171 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RN7SL98P-201ENST00000462271 300 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC010631.1-201ENST00000474150 156 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC041039.1-201ENST00000485656 536 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC106872.2-201ENST00000494303 480 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC146944.2-203ENST00000502493 354 ntBASIC3.59□□□□□ -1.83
SOX2P48431 AC114786.4-201ENST00000508771 728 ntBASIC3.59□□□□□ -1.83
SOX2P48431 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 AC139495.1-202ENST00000513164 354 ntBASIC3.59□□□□□ -1.83
SOX2P48431 LRRC34P2-201ENST00000514850 553 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RNU6-507P-201ENST00000516045 100 ntBASIC3.59□□□□□ -1.83
SOX2P48431 RNU6-390P-201ENST00000516259 103 ntBASIC3.59□□□□□ -1.83
SOX2P48431 Vault.1-201ENST00000516474 102 ntBASIC3.59□□□□□ -1.83
SOX2P48431 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC3.59□□□□□ -1.83
SOX2P48431 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC3.59□□□□□ -1.83
SOX2P48431 OR5AL2P-201ENST00000532185 920 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 125 ms