Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AL158211.4-201ENST00000606988 584 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC004067.1-201ENST00000608733 700 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC018816.2-201ENST00000621460 353 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC008443.7-201ENST00000622195 246 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AL357559.1-201ENST00000622228 274 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AC034229.5-201ENST00000624258 185 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 AL159972.1-201ENST00000625150 448 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 GABRG2-229ENST00000641017 3628 ntBASIC3.36□□□□□ -1.87
HNF4AP41235 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HNF4AP41235 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HNF4AP41235 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
HNF4AP41235 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
HNF4AP41235 ARHGAP12-201ENST00000311380 4625 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
HNF4AP41235 AL161781.1-201ENST00000354277 403 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 Y_RNA.77-201ENST00000362962 107 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 RNU6-359P-201ENST00000365466 108 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 MIR218-2-201ENST00000385006 110 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HNF4AP41235 MTCYBP38-201ENST00000417160 1123 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.35□□□□□ -1.87
HNF4AP41235 AL589823.1-201ENST00000429577 183 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 HMGN2P31-201ENST00000432430 273 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC129850.1-201ENST00000436203 508 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 MTCYBP39-201ENST00000437562 491 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC009237.8-201ENST00000445492 379 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 RPL23AP35-201ENST00000451906 501 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC010099.1-201ENST00000455434 375 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.35□□□□□ -1.87
HNF4AP41235 SNORD121B-201ENST00000458838 81 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC091179.1-201ENST00000461606 579 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 PDCD10-214ENST00000487947 716 ntTSL 5 BASIC3.35□□□□□ -1.87
HNF4AP41235 AC110768.1-201ENST00000509222 400 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 RNU6-714P-201ENST00000516963 103 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 SNORA31.22-201ENST00000517204 135 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 COX6CP8-201ENST00000522620 226 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC3.35□□□□□ -1.87
HNF4AP41235 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
HNF4AP41235 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC3.35□□□□□ -1.87
HNF4AP41235 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.35□□□□□ -1.87
HNF4AP41235 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.35□□□□□ -1.87
HNF4AP41235 CYCSP2-201ENST00000558168 301 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 ACTR3BP3-201ENST00000565577 979 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 AC103987.3-201ENST00000582071 292 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.35□□□□□ -1.87
HNF4AP41235 AC073114.1-201ENST00000612027 490 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
HNF4AP41235 AC099063.3-201ENST00000642066 185 ntBASIC3.35□□□□□ -1.87
HNF4AP41235 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.35□□□□□ -1.87
HNF4AP41235 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.87
HNF4AP41235 AC032011.1-201ENST00000611703 1549 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC3.34□□□□□ -1.87
HNF4AP41235 Y_RNA.201-201ENST00000364052 96 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 MT-TH-201ENST00000387441 69 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 SNORA26.8-201ENST00000391306 124 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 RN7SKP111-201ENST00000410349 271 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 TPMTP3-201ENST00000411928 735 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 RPL7P8-201ENST00000411964 730 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
HNF4AP41235 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC017079.2-201ENST00000416102 485 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC069157.1-201ENST00000421749 137 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 NDUFB4P7-201ENST00000423198 363 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 PPP1R11P2-201ENST00000423543 382 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC244035.1-201ENST00000430042 390 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 TAAR7P-201ENST00000436141 242 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.34□□□□□ -1.87
HNF4AP41235 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.34□□□□□ -1.87
HNF4AP41235 AL139383.1-203ENST00000445227 420 ntTSL 3 BASIC3.34□□□□□ -1.87
HNF4AP41235 AL360221.1-201ENST00000445989 335 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC002381.1-201ENST00000447049 280 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.34□□□□□ -1.87
HNF4AP41235 RPS29P12-201ENST00000460178 152 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.34□□□□□ -1.87
HNF4AP41235 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.34□□□□□ -1.87
HNF4AP41235 DSTNP2-201ENST00000504533 515 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.34□□□□□ -1.87
HNF4AP41235 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC026403.1-201ENST00000518938 295 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.34□□□□□ -1.87
HNF4AP41235 OR5G4P-201ENST00000525251 760 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC103843.2-201ENST00000530523 682 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 OR5B10P-201ENST00000532869 642 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 OR4H12P-201ENST00000556269 907 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC012170.2-201ENST00000560380 667 ntTSL 3 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.34□□□□□ -1.87
HNF4AP41235 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.34□□□□□ -1.87
HNF4AP41235 AL353997.4-201ENST00000586196 166 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC006557.5-201ENST00000603126 811 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 ACTR3BP1-201ENST00000605584 1247 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AC092140.2-201ENST00000618027 521 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.34□□□□□ -1.87
HNF4AP41235 AL513302.2-201ENST00000562313 1842 ntBASIC3.34□□□□□ -1.87
HNF4AP41235 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3.34□□□□□ -1.88
HNF4AP41235 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.34□□□□□ -1.88
HNF4AP41235 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC3.34□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 125.4 ms