Protein–RNA interactions for Protein: P35453

HOXD13, Homeobox protein Hox-D13, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD13P35453 USP9YP36-201ENST00000424581 829 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 AC109583.1-201ENST00000432156 268 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 RNU7-125P-201ENST00000458760 62 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 SNORA31.1-201ENST00000515993 133 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 SNORA31.5-201ENST00000516190 133 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 RNU6-711P-201ENST00000517255 106 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 AC026407.1-201ENST00000518369 204 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 MAL2-206ENST00000522187 547 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.59□□□□□ -1.83
HOXD13P35453 DUXAP5-201ENST00000529668 529 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC124947.2-202ENST00000552735 133 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 NCAPGP2-201ENST00000557911 754 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.59□□□□□ -1.83
HOXD13P35453 AC015917.1-201ENST00000579654 510 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 AC100793.4-201ENST00000613683 429 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.59□□□□□ -1.83
HOXD13P35453 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HOXD13P35453 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.59□□□□□ -1.84
HOXD13P35453 AC021755.1-201ENST00000559747 1447 ntBASIC3.59□□□□□ -1.84
HOXD13P35453 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXD13P35453 ASPN-201ENST00000375543 2237 ntTSL 2 BASIC3.59□□□□□ -1.84
HOXD13P35453 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.84
HOXD13P35453 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD13P35453 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 RNU1-75P-201ENST00000347264 129 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 RNU5F-7P-201ENST00000363696 115 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 EI24P2-201ENST00000397776 1076 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 RNU4-72P-201ENST00000410754 173 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC092447.3-201ENST00000426027 686 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.58□□□□□ -1.84
HOXD13P35453 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD13P35453 LARP1BP3-201ENST00000437229 869 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 ELOCP30-201ENST00000447108 299 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AL133217.1-201ENST00000450980 425 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AC108059.3-201ENST00000456388 214 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 RPL21P10-201ENST00000463521 490 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AC068587.2-201ENST00000478386 781 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 RPF2P2-201ENST00000504693 896 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AC005178.1-201ENST00000508392 440 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD13P35453 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 AL158211.1-201ENST00000566763 763 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC079089.3-201ENST00000603094 673 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC010133.1-201ENST00000615809 842 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 MIR6075-201ENST00000620782 95 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 AC027309.3-201ENST00000623419 351 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 AC092192.1-201ENST00000633154 1018 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.58□□□□□ -1.84
HOXD13P35453 OR4G2P-202ENST00000641004 1759 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 Z83843.1-201ENST00000604070 3685 ntBASIC3.58□□□□□ -1.84
HOXD13P35453 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HOXD13P35453 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD13P35453 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD13P35453 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
HOXD13P35453 AC110754.1-201ENST00000399740 601 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AL357075.1-201ENST00000404107 726 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 VPS26BP1-201ENST00000417155 755 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD13P35453 AL390023.1-201ENST00000428836 262 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 YME1L1P1-201ENST00000429435 297 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 USP12PX-201ENST00000432383 1057 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AC092573.2-201ENST00000434546 243 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 TAAR7P-201ENST00000436141 242 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 UBE2D3P1-201ENST00000436669 444 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 ISCA1P2-201ENST00000438679 421 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 AL512286.1-201ENST00000439244 400 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 RPL36AP33-201ENST00000450395 310 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 ART2BP-201ENST00000453501 499 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 HMGN1P18-201ENST00000457642 277 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD13P35453 AC055855.1-201ENST00000489563 579 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.57□□□□□ -1.84
HOXD13P35453 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.57□□□□□ -1.84
HOXD13P35453 RNA5SP291-201ENST00000517222 105 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 DUXAP2-201ENST00000519198 589 ntBASIC3.57□□□□□ -1.84
HOXD13P35453 OR5G4P-201ENST00000525251 760 ntBASIC3.57□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 81.8 ms