Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC097714.1-201ENST00000511272 1647 ntBASIC2.68□□□□□ -1.98
RORAP35398 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.68□□□□□ -1.98
RORAP35398 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RORAP35398 MTND4P13-201ENST00000402078 1023 ntBASIC2.68□□□□□ -1.98
RORAP35398 RNA5SP184-201ENST00000411071 108 ntBASIC2.68□□□□□ -1.98
RORAP35398 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 AL592310.1-201ENST00000414330 671 ntBASIC2.68□□□□□ -1.98
RORAP35398 AL356320.2-201ENST00000417263 507 ntBASIC2.68□□□□□ -1.98
RORAP35398 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC2.68□□□□□ -1.98
RORAP35398 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.68□□□□□ -1.98
RORAP35398 ZDHHC20P2-201ENST00000424108 429 ntBASIC2.68□□□□□ -1.98
RORAP35398 AL589935.1-218ENST00000434683 529 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 RAC1P7-201ENST00000445367 377 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC108938.1-201ENST00000451204 136 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC108734.3-201ENST00000481241 1165 ntBASIC2.68□□□□□ -1.98
RORAP35398 AP001025.2-201ENST00000490908 477 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC023424.2-201ENST00000493479 777 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC090453.1-201ENST00000495560 436 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 AC008837.2-201ENST00000513076 418 ntBASIC2.68□□□□□ -1.98
RORAP35398 RPPH1-2P-201ENST00000516688 293 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 PIGY-201ENST00000527353 217 ntAPPRIS P1 BASIC2.68□□□□□ -1.98
RORAP35398 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC2.68□□□□□ -1.98
RORAP35398 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.68□□□□□ -1.98
RORAP35398 AC005014.3-201ENST00000605985 190 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC080013.4-201ENST00000607624 649 ntBASIC2.68□□□□□ -1.98
RORAP35398 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.68□□□□□ -1.98
RORAP35398 AC140725.3-201ENST00000616193 880 ntBASIC2.68□□□□□ -1.98
RORAP35398 Z99129.2-201ENST00000619967 314 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC010338.1-201ENST00000621823 717 ntBASIC2.68□□□□□ -1.98
RORAP35398 AC027309.3-201ENST00000623419 351 ntBASIC2.68□□□□□ -1.98
RORAP35398 OR1S1-201ENST00000624470 978 ntBASIC2.68□□□□□ -1.98
RORAP35398 CHD9-202ENST00000398510 11337 ntTSL 1 (best) BASIC2.68□□□□□ -1.98
RORAP35398 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC2.68□□□□□ -1.98
RORAP35398 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.67□□□□□ -1.98
RORAP35398 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.67□□□□□ -1.98
RORAP35398 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RORAP35398 NACA3P-201ENST00000359690 648 ntBASIC2.67□□□□□ -1.98
RORAP35398 RNU1-35P-201ENST00000362782 153 ntBASIC2.67□□□□□ -1.98
RORAP35398 MIR627-201ENST00000384979 97 ntBASIC2.67□□□□□ -1.98
RORAP35398 RNA5SP354-201ENST00000391247 136 ntBASIC2.67□□□□□ -1.98
RORAP35398 AL360182.1-201ENST00000397433 468 ntBASIC2.67□□□□□ -1.98
RORAP35398 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.67□□□□□ -1.98
RORAP35398 RNA5SP80-201ENST00000410475 111 ntBASIC2.67□□□□□ -1.98
RORAP35398 AL096701.2-201ENST00000416920 238 ntBASIC2.67□□□□□ -1.98
RORAP35398 MTATP6P27-201ENST00000416987 621 ntBASIC2.67□□□□□ -1.98
RORAP35398 OFD1P11Y-201ENST00000418213 1177 ntBASIC2.67□□□□□ -1.98
RORAP35398 BEND7P1-201ENST00000422058 457 ntBASIC2.67□□□□□ -1.98
RORAP35398 NANOGP2-201ENST00000435391 727 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC2.67□□□□□ -1.98
RORAP35398 MTCO1P53-201ENST00000441633 699 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.67□□□□□ -1.98
RORAP35398 RPL23AP76-201ENST00000441860 458 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC234775.1-201ENST00000454247 670 ntBASIC2.67□□□□□ -1.98
RORAP35398 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC2.67□□□□□ -1.98
RORAP35398 AC113347.3-201ENST00000509113 148 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC093677.1-201ENST00000514414 678 ntBASIC2.67□□□□□ -1.98
RORAP35398 RNY4P37-201ENST00000516225 96 ntBASIC2.67□□□□□ -1.98
RORAP35398 HSPA8P13-201ENST00000523715 472 ntBASIC2.67□□□□□ -1.98
RORAP35398 OR4K8P-201ENST00000578842 1048 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC2.67□□□□□ -1.98
RORAP35398 AL035413.2-201ENST00000604801 525 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC097504.2-201ENST00000608088 454 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC097717.1-250ENST00000608498 273 ntTSL 5 BASIC2.67□□□□□ -1.98
RORAP35398 AL161734.1-201ENST00000609720 557 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC090115.4-201ENST00000609970 188 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC104763.3-201ENST00000613765 618 ntBASIC2.67□□□□□ -1.98
RORAP35398 AC008568.2-201ENST00000623862 2313 ntBASIC2.67□□□□□ -1.98
RORAP35398 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RORAP35398 AC009812.4-201ENST00000569134 1805 ntBASIC2.66□□□□□ -1.98
RORAP35398 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RORAP35398 RNU6-343P-201ENST00000364709 104 ntBASIC2.66□□□□□ -1.98
RORAP35398 MIR512-1-201ENST00000384913 84 ntBASIC2.66□□□□□ -1.98
RORAP35398 MIR122-201ENST00000385044 85 ntBASIC2.66□□□□□ -1.98
RORAP35398 CD3D-202ENST00000392884 476 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 AL356131.1-201ENST00000405826 414 ntBASIC2.66□□□□□ -1.98
RORAP35398 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RORAP35398 AL592148.1-201ENST00000413568 445 ntBASIC2.66□□□□□ -1.98
RORAP35398 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 AC063976.3-201ENST00000426849 329 ntBASIC2.66□□□□□ -1.98
RORAP35398 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC2.66□□□□□ -1.98
RORAP35398 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.66□□□□□ -1.98
RORAP35398 AL109933.2-201ENST00000452651 260 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC2.66□□□□□ -1.98
RORAP35398 RPL18AP17-201ENST00000455326 198 ntBASIC2.66□□□□□ -1.98
RORAP35398 RPL31P50-201ENST00000471002 296 ntBASIC2.66□□□□□ -1.98
RORAP35398 AP004217.1-201ENST00000480579 346 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC006499.2-201ENST00000513470 337 ntBASIC2.66□□□□□ -1.98
RORAP35398 AC034159.1-201ENST00000513885 583 ntBASIC2.66□□□□□ -1.98
RORAP35398 MTND5P4-201ENST00000514978 288 ntBASIC2.66□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms