Protein–RNA interactions for Protein: P32297

CHRNA3, Neuronal acetylcholine receptor subunit alpha-3, humanhuman

Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3P32297 USP9YP11-201ENST00000427537 717 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 LINC01688-201ENST00000435492 259 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA3P32297 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
CHRNA3P32297 COX7BP2-201ENST00000437976 242 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA3P32297 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA3P32297 MTATP6P26-201ENST00000445926 662 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 MIR217HG-201ENST00000446139 900 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA3P32297 PTENP1-201ENST00000447117 1215 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 MTCYBP17-201ENST00000503579 789 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AC006499.2-201ENST00000513470 337 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 RAP1B-224ENST00000541216 701 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA3P32297 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA3P32297 MYL12B-204ENST00000584539 1064 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CHRNA3P32297 MIR4506-201ENST00000584693 77 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AC004987.4-201ENST00000603383 338 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AC106791.2-201ENST00000604680 391 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AL390208.1-201ENST00000605885 644 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AL357080.1-201ENST00000617394 239 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 MIR6130-201ENST00000619419 109 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC3.17□□□□□ -1.9
CHRNA3P32297 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC3.17□□□□□ -1.9
CHRNA3P32297 MIR622-201ENST00000638396 96 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CHRNA3P32297 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
CHRNA3P32297 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CHRNA3P32297 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.17□□□□□ -1.9
CHRNA3P32297 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.17□□□□□ -1.9
CHRNA3P32297 AL355596.1-201ENST00000565399 3996 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 FAM133CP-201ENST00000332869 704 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AL138885.1-201ENST00000405921 675 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 RPS3AP24-201ENST00000407896 734 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC096664.2-201ENST00000411843 406 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 TPMTP2-201ENST00000414372 726 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA3P32297 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 THAP5P1-201ENST00000439089 262 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AL049714.1-201ENST00000466686 347 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 S100A11P2-201ENST00000467589 312 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC104472.2-201ENST00000469035 601 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC091212.1-201ENST00000474798 395 ntTSL 5 BASIC3.16□□□□□ -1.9
CHRNA3P32297 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA3P32297 XKRY-201ENST00000510392 1100 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC017037.2-201ENST00000513850 890 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC008885.1-201ENST00000514930 301 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 PSMA2P1-201ENST00000526365 646 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 HTN3-205ENST00000530128 775 ntAPPRIS P2 TSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 LINC02311-201ENST00000556144 383 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA3P32297 AC002400.1-201ENST00000569310 726 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC3.16□□□□□ -1.9
CHRNA3P32297 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC3.16□□□□□ -1.9
CHRNA3P32297 BNIP3P26-201ENST00000600827 554 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC006539.2-201ENST00000601729 572 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AF131215.7-201ENST00000602443 707 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 DUXAP3-201ENST00000603616 594 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 AC097478.2-201ENST00000610572 514 ntBASIC3.16□□□□□ -1.9
CHRNA3P32297 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.16□□□□□ -1.9
CHRNA3P32297 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA3P32297 MBNL3-205ENST00000370857 8760 ntTSL 5 BASIC3.16□□□□□ -1.9
CHRNA3P32297 COMMD8-201ENST00000381571 1469 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CHRNA3P32297 AL035425.3-201ENST00000564206 4996 ntBASIC3.15□□□□□ -1.9
CHRNA3P32297 AC108206.1-201ENST00000570186 4159 ntBASIC3.15□□□□□ -1.9
CHRNA3P32297 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.15□□□□□ -1.9
CHRNA3P32297 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.15□□□□□ -1.9
CHRNA3P32297 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
CHRNA3P32297 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 Y_RNA.111-201ENST00000363248 100 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RNU6-1214P-201ENST00000363650 109 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RNU6-621P-201ENST00000364752 109 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 Y_RNA.408-201ENST00000383987 102 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RNU6-1197P-201ENST00000391183 107 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 NDUFB4P4-201ENST00000404822 243 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RNA5SP80-201ENST00000410475 111 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AL008987.1-201ENST00000415528 237 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 TIMM9P2-201ENST00000419324 266 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.15□□□□□ -1.91
CHRNA3P32297 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC3.15□□□□□ -1.91
CHRNA3P32297 MTCYBP45-201ENST00000435243 565 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RPL26P6-201ENST00000440913 438 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.15□□□□□ -1.91
CHRNA3P32297 AC234775.1-201ENST00000454247 670 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC3.15□□□□□ -1.91
CHRNA3P32297 USP9YP25-201ENST00000457708 443 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 RPL21P41-201ENST00000459863 264 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.15□□□□□ -1.91
CHRNA3P32297 RPL7P5-201ENST00000471472 736 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC3.15□□□□□ -1.91
CHRNA3P32297 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.15□□□□□ -1.91
CHRNA3P32297 AC109464.2-201ENST00000510242 943 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AP002404.1-201ENST00000532005 451 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 DNAJC8P1-201ENST00000554535 372 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AL354943.1-201ENST00000572103 781 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AC083760.1-201ENST00000589621 670 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.15□□□□□ -1.91
CHRNA3P32297 AC012119.1-201ENST00000603184 222 ntBASIC3.15□□□□□ -1.91
CHRNA3P32297 HSPE1P7-201ENST00000604681 321 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms