Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AC104308.1-201ENST00000454621 333 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXA13P31271 RPL21P104-201ENST00000464143 478 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RAP1BP2-201ENST00000478270 544 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RPS29P2-201ENST00000479278 136 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 RPS4XP13-201ENST00000483219 789 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 NIPA2P2-201ENST00000496376 1083 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 VN1R104P-201ENST00000505115 1009 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 MTND5P13-201ENST00000513046 1079 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC026801.2-201ENST00000515352 425 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 NDST1-AS1-201ENST00000519040 368 ntTSL 2 BASIC3.65□□□□□ -1.83
HOXA13P31271 RPL12P22-201ENST00000519073 490 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC060788.1-201ENST00000521318 469 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 MTND4LP18-201ENST00000526864 291 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC007115.1-201ENST00000546853 234 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.65□□□□□ -1.83
HOXA13P31271 ROCK1P1-201ENST00000573767 549 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 MIR3690-201ENST00000580266 75 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC060771.1-201ENST00000582031 164 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 UBL5P2-201ENST00000583788 219 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC112187.2-201ENST00000604345 283 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AC091965.4-201ENST00000607691 587 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
HOXA13P31271 Z69908.1-201ENST00000622603 247 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 PRKACB-219ENST00000614872 4306 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
HOXA13P31271 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.65□□□□□ -1.83
HOXA13P31271 PABPC1P9-201ENST00000426076 1612 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 HSPA8P1-201ENST00000425843 1833 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 AF127577.6-201ENST00000623352 2191 ntBASIC3.65□□□□□ -1.83
HOXA13P31271 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC3.64□□□□□ -1.83
HOXA13P31271 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.64□□□□□ -1.83
HOXA13P31271 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
HOXA13P31271 RNU4-75P-201ENST00000364621 146 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 RNU6-359P-201ENST00000365466 108 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AP002088.1-201ENST00000382740 395 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 U3.20-201ENST00000390909 217 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 RNU6-882P-201ENST00000391025 103 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AL359704.1-201ENST00000411586 781 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 RPS27AP14-201ENST00000422868 454 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AL445669.1-201ENST00000426743 755 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 DLGAP5P1-201ENST00000430307 464 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AL365184.2-201ENST00000431139 435 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AC010153.1-201ENST00000432862 727 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 RPL37P21-201ENST00000435890 276 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AL512286.1-201ENST00000439244 400 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC108734.1-201ENST00000439549 399 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AL360221.1-201ENST00000445989 335 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 RPL31P3-201ENST00000458430 332 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC092754.2-201ENST00000463506 460 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 Y_RNA.655-201ENST00000515919 96 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 RNU6-798P-201ENST00000516912 103 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 ZNF192P1-203ENST00000565888 810 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC037487.4-201ENST00000577423 625 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 NBR2-204ENST00000587322 63 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.64□□□□□ -1.83
HOXA13P31271 AP001429.1-201ENST00000602568 530 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 uc_338.25-201ENST00000613756 156 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 MIR7844-201ENST00000616161 122 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 AC092140.2-201ENST00000618027 521 ntBASIC3.64□□□□□ -1.83
HOXA13P31271 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
HOXA13P31271 AL353746.1-201ENST00000566293 6881 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 TRAPPC13-204ENST00000438419 1437 ntAPPRIS P4 TSL 1 (best) BASIC3.63□□□□□ -1.83
HOXA13P31271 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC3.63□□□□□ -1.83
HOXA13P31271 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.63□□□□□ -1.83
HOXA13P31271 AC010733.2-201ENST00000589496 5702 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 GNG5P1-201ENST00000255500 204 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
HOXA13P31271 RNU4-24P-201ENST00000364565 139 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RNU6-769P-201ENST00000384407 104 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RNU6-809P-201ENST00000384461 107 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RNU6-55P-201ENST00000411092 107 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RNU6-954P-201ENST00000411355 107 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RPL30P2-201ENST00000414021 291 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 ZNF885P-201ENST00000420174 1098 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 MTCO1P39-201ENST00000426148 480 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 AC091390.3-201ENST00000426478 338 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 LARP1BP3-201ENST00000437229 869 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 SNORD121B-201ENST00000458838 81 ntBASIC3.63□□□□□ -1.83
HOXA13P31271 RPL23AP62-201ENST00000463396 453 ntBASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms