Protein–RNA interactions for Protein: P28358

HOXD10, Homeobox protein Hox-D10, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD10P28358 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.1□□□□□ -1.91
HOXD10P28358 LINC01482-203ENST00000589610 468 ntTSL 3 BASIC3.1□□□□□ -1.91
HOXD10P28358 RNASEH2B-AS1-206ENST00000601286 657 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXD10P28358 MTND3P19-201ENST00000603825 345 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 U1.23-201ENST00000610293 146 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC069234.5-201ENST00000611056 416 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 IGKV1D-33-202ENST00000611734 324 ntAPPRIS ALT2 TSL 5 BASIC3.1□□□□□ -1.91
HOXD10P28358 RNU1-68P-201ENST00000615382 146 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC123767.1-202ENST00000620407 817 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 U1.39-201ENST00000621562 146 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AC109454.4-201ENST00000623411 649 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 ZNF663P-202ENST00000641770 1131 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD10P28358 AC108206.1-201ENST00000570186 4159 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 AP005901.5-201ENST00000545779 1796 ntBASIC3.1□□□□□ -1.91
HOXD10P28358 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXD10P28358 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD10P28358 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 GABRG2-229ENST00000641017 3628 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC244517.1-201ENST00000606030 2086 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD10P28358 RNU6-492P-201ENST00000363035 104 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 RNU4-51P-201ENST00000364206 140 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXD10P28358 SNORA51.6-201ENST00000384151 125 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 SNORD116-12-201ENST00000384468 92 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 MIR512-1-201ENST00000384913 84 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 RNU6-821P-201ENST00000390995 107 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AL023807.1-201ENST00000407932 359 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 RNU6ATAC37P-201ENST00000408328 131 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 AL133384.1-201ENST00000412744 351 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 Z98742.3-201ENST00000418637 326 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 BX276092.3-201ENST00000424182 230 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 MTCO1P3-201ENST00000429327 192 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 SEPT7P5-201ENST00000434048 306 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 GTF2IP7-202ENST00000436677 309 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AL513043.1-201ENST00000439124 535 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 RPL39P40-201ENST00000445481 146 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 SETP11-201ENST00000473027 690 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 VPS26AP1-201ENST00000483197 979 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 RPS29P21-201ENST00000496272 170 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXD10P28358 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXD10P28358 BOLA3P3-201ENST00000505182 232 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 IGKV3-31-201ENST00000523109 329 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXD10P28358 AC007954.1-201ENST00000554198 494 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 MTCYBP23-201ENST00000558717 1102 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 MTND3P13-201ENST00000574391 343 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXD10P28358 AC015688.2-201ENST00000584523 262 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC092954.1-201ENST00000609121 445 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 AL078595.3-201ENST00000623815 1166 ntBASIC3.09□□□□□ -1.91
HOXD10P28358 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
HOXD10P28358 AP000526.1-201ENST00000603308 1388 ntBASIC3.09□□□□□ -1.92
HOXD10P28358 GABRG2-209ENST00000638660 3799 ntTSL 5 BASIC3.09□□□□□ -1.92
HOXD10P28358 TAB3P1-202ENST00000452645 1634 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXD10P28358 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD10P28358 SNORD56.3-201ENST00000363507 71 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 KRTAP22-2-201ENST00000382830 293 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
HOXD10P28358 RNA5SP252-201ENST00000391131 119 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 TMSB4XP8-201ENST00000402089 135 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 TMSB4XP6-201ENST00000415187 135 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 MTCO3P1-205ENST00000422088 832 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 TMSB4XP1-201ENST00000424567 135 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AL390023.1-201ENST00000428836 262 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 SUMO1P4-201ENST00000429430 302 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD10P28358 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXD10P28358 AC092393.1-201ENST00000439625 742 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
HOXD10P28358 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXD10P28358 AC004022.1-201ENST00000447766 1066 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 GTF2IP9-201ENST00000502460 301 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 RAC1P5-201ENST00000512182 576 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD10P28358 AC245166.1-201ENST00000521012 253 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXD10P28358 LINC00640-203ENST00000556479 576 ntTSL 2 BASIC3.08□□□□□ -1.92
HOXD10P28358 DEFB122-202ENST00000569013 197 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 LARP7P2-201ENST00000575306 125 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 MIR4509-3-201ENST00000578671 94 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 MIR4509-2-201ENST00000583920 94 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 ZNF861P-201ENST00000588126 639 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 RNU4-5P-201ENST00000607255 135 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC009974.1-201ENST00000608881 455 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC027449.1-201ENST00000608890 407 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AP000240.1-201ENST00000609910 452 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AL359198.2-201ENST00000611836 194 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 PART1_2.1-201ENST00000612397 250 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 MIR4509-1-201ENST00000618224 94 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC073968.1-201ENST00000618594 637 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC022960.3-201ENST00000619794 441 ntBASIC3.08□□□□□ -1.92
HOXD10P28358 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXD10P28358 CNOT1-223ENST00000628857 291 ntTSL 5 BASIC3.08□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms