Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AL670379.9-201ENST00000605428 253 ntBASIC5.35□□□□□ -1.55
LIG1P18858 AC011373.1-201ENST00000607270 237 ntBASIC5.35□□□□□ -1.55
LIG1P18858 AC090425.1-201ENST00000610007 140 ntBASIC5.35□□□□□ -1.55
LIG1P18858 FAM27B-201ENST00000610601 213 ntBASIC5.35□□□□□ -1.55
LIG1P18858 AL157817.1-201ENST00000614264 790 ntBASIC5.35□□□□□ -1.55
LIG1P18858 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC5.35□□□□□ -1.55
LIG1P18858 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIG1P18858 AC018529.3-201ENST00000624212 2254 ntBASIC5.35□□□□□ -1.55
LIG1P18858 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
LIG1P18858 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC5.35□□□□□ -1.55
LIG1P18858 AL442639.1-201ENST00000625030 1899 ntBASIC5.34□□□□□ -1.55
LIG1P18858 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 TANK-205ENST00000405852 2155 ntTSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 RPS12P24-201ENST00000412619 387 ntBASIC5.34□□□□□ -1.55
LIG1P18858 VDAC1P9-201ENST00000412766 841 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC5.34□□□□□ -1.55
LIG1P18858 SKA2P1-201ENST00000425592 390 ntBASIC5.34□□□□□ -1.55
LIG1P18858 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC5.34□□□□□ -1.55
LIG1P18858 AL035666.1-201ENST00000446195 348 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC006967.1-201ENST00000467608 589 ntBASIC5.34□□□□□ -1.55
LIG1P18858 RPS27P27-201ENST00000498779 255 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC5.34□□□□□ -1.55
LIG1P18858 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC5.34□□□□□ -1.55
LIG1P18858 AP000763.2-201ENST00000540641 163 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC5.34□□□□□ -1.55
LIG1P18858 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 AC012100.2-201ENST00000558317 304 ntTSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC5.34□□□□□ -1.55
LIG1P18858 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 MIR4680-201ENST00000580906 66 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC069061.3-201ENST00000582254 823 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC023043.2-201ENST00000589678 1026 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC104662.1-201ENST00000604448 511 ntBASIC5.34□□□□□ -1.55
LIG1P18858 5S_rRNA.16-201ENST00000612928 119 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC133104.2-201ENST00000615272 193 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AL590099.1-201ENST00000615276 138 ntBASIC5.34□□□□□ -1.55
LIG1P18858 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.55
LIG1P18858 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC5.34□□□□□ -1.55
LIG1P18858 AC022418.1-201ENST00000624118 445 ntBASIC5.34□□□□□ -1.55
LIG1P18858 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 BDP1P-201ENST00000582658 1990 ntBASIC5.34□□□□□ -1.55
LIG1P18858 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 LINC01847-201ENST00000522627 5607 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
LIG1P18858 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
LIG1P18858 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
LIG1P18858 CFAP70-203ENST00000355577 3691 ntTSL 5 BASIC5.34□□□□□ -1.56
LIG1P18858 AC087190.4-201ENST00000574616 8334 ntBASIC5.34□□□□□ -1.56
LIG1P18858 TCEANC-201ENST00000380600 2988 ntAPPRIS P1 TSL 3 BASIC5.34□□□□□ -1.56
LIG1P18858 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 Y_RNA.193-201ENST00000363979 102 ntBASIC5.33□□□□□ -1.56
LIG1P18858 SNORD115-7-201ENST00000365306 82 ntBASIC5.33□□□□□ -1.56
LIG1P18858 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LIG1P18858 AL136372.1-201ENST00000403060 228 ntBASIC5.33□□□□□ -1.56
LIG1P18858 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 AC009310.1-201ENST00000414414 451 ntBASIC5.33□□□□□ -1.56
LIG1P18858 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.33□□□□□ -1.56
LIG1P18858 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC5.33□□□□□ -1.56
LIG1P18858 AL731563.1-201ENST00000442202 214 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC5.33□□□□□ -1.56
LIG1P18858 MTND1P17-201ENST00000448961 204 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AC079168.2-201ENST00000453977 416 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AURKAPS2-201ENST00000454983 333 ntBASIC5.33□□□□□ -1.56
LIG1P18858 DHFRP3-201ENST00000455595 559 ntBASIC5.33□□□□□ -1.56
LIG1P18858 MTCO3P10-201ENST00000455912 772 ntBASIC5.33□□□□□ -1.56
LIG1P18858 RPL30P15-201ENST00000457129 321 ntBASIC5.33□□□□□ -1.56
LIG1P18858 LEKR1-205ENST00000477399 621 ntTSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 RPS23P1-201ENST00000491662 432 ntBASIC5.33□□□□□ -1.56
LIG1P18858 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 COX7A2P2-201ENST00000505291 250 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AC079140.5-201ENST00000507882 310 ntBASIC5.33□□□□□ -1.56
LIG1P18858 CARD16-203ENST00000525374 503 ntTSL 3 BASIC5.33□□□□□ -1.56
LIG1P18858 AL133153.1-201ENST00000557756 303 ntBASIC5.33□□□□□ -1.56
LIG1P18858 AC024619.4-201ENST00000580924 316 ntBASIC5.33□□□□□ -1.56
LIG1P18858 MIR5583-1-201ENST00000580941 59 ntBASIC5.33□□□□□ -1.56
LIG1P18858 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC5.33□□□□□ -1.56
LIG1P18858 AC083806.3-201ENST00000614016 455 ntBASIC5.33□□□□□ -1.56
LIG1P18858 CR381572.2-201ENST00000624852 397 ntBASIC5.33□□□□□ -1.56
LIG1P18858 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC5.33□□□□□ -1.56
LIG1P18858 AC008013.2-202ENST00000637965 364 ntBASIC5.33□□□□□ -1.56
LIG1P18858 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
LIG1P18858 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC5.33□□□□□ -1.56
LIG1P18858 KCNU1-201ENST00000399881 3695 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
LIG1P18858 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
LIG1P18858 FCHO2-207ENST00000512348 2700 ntTSL 2 BASIC5.32□□□□□ -1.56
LIG1P18858 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
LIG1P18858 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms