Protein–RNA interactions for Protein: P16112

ACAN, Aggrecan core protein, humanhuman

Predictions only

Length 2,415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACANP16112 AC023825.1-201ENST00000566704 1030 ntBASIC1.12□□□□□ -2.23
ACANP16112 AC104365.1-201ENST00000588835 394 ntTSL 5 BASIC1.12□□□□□ -2.23
ACANP16112 AC083806.3-201ENST00000614016 455 ntBASIC1.12□□□□□ -2.23
ACANP16112 AC034102.8-201ENST00000615146 484 ntBASIC1.12□□□□□ -2.23
ACANP16112 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC1.12□□□□□ -2.23
ACANP16112 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.12□□□□□ -2.23
ACANP16112 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
ACANP16112 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC1.12□□□□□ -2.23
ACANP16112 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.11□□□□□ -2.23
ACANP16112 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC1.11□□□□□ -2.23
ACANP16112 RPL17P12-201ENST00000413391 526 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC1.11□□□□□ -2.23
ACANP16112 WARS2P1-201ENST00000429678 537 ntBASIC1.11□□□□□ -2.23
ACANP16112 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.11□□□□□ -2.23
ACANP16112 RNA5SP121-201ENST00000516537 101 ntBASIC1.11□□□□□ -2.23
ACANP16112 PRELID2P1-201ENST00000552837 301 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC091488.1-201ENST00000604239 660 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC112191.3-201ENST00000604371 277 ntBASIC1.11□□□□□ -2.23
ACANP16112 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ACANP16112 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
ACANP16112 AC114973.1-201ENST00000429057 632 ntBASIC1.11□□□□□ -2.23
ACANP16112 IFNWP4-201ENST00000453148 294 ntBASIC1.11□□□□□ -2.23
ACANP16112 AL583843.1-201ENST00000456070 346 ntBASIC1.11□□□□□ -2.23
ACANP16112 snoU13.3-201ENST00000459441 104 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC1.11□□□□□ -2.23
ACANP16112 VTA1P2-201ENST00000520205 911 ntBASIC1.11□□□□□ -2.23
ACANP16112 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC1.11□□□□□ -2.23
ACANP16112 AL109653.1-201ENST00000603091 248 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC048347.1-201ENST00000624621 427 ntBASIC1.11□□□□□ -2.23
ACANP16112 AC009452.1-201ENST00000640823 606 ntBASIC1.11□□□□□ -2.23
ACANP16112 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC1.11□□□□□ -2.23
ACANP16112 ZGRF1-203ENST00000445203 6529 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
ACANP16112 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
ACANP16112 RNU6-461P-201ENST00000364195 107 ntBASIC1.1□□□□□ -2.23
ACANP16112 MTCO3P44-201ENST00000510977 541 ntBASIC1.1□□□□□ -2.23
ACANP16112 MTND5P4-201ENST00000514978 288 ntBASIC1.1□□□□□ -2.23
ACANP16112 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC1.1□□□□□ -2.23
ACANP16112 AC104350.1-201ENST00000518750 877 ntTSL 3 BASIC1.1□□□□□ -2.23
ACANP16112 AC006270.2-201ENST00000578523 652 ntBASIC1.1□□□□□ -2.23
ACANP16112 AL590095.2-201ENST00000604136 117 ntBASIC1.1□□□□□ -2.23
ACANP16112 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC1.1□□□□□ -2.23
ACANP16112 HECTD2-202ENST00000371667 4354 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
ACANP16112 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC1.1□□□□□ -2.23
ACANP16112 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC1.1□□□□□ -2.23
ACANP16112 RNU6-716P-201ENST00000365621 103 ntBASIC1.1□□□□□ -2.23
ACANP16112 MIR320A-201ENST00000385302 82 ntBASIC1.1□□□□□ -2.23
ACANP16112 RNA5SP489-201ENST00000410986 109 ntBASIC1.1□□□□□ -2.23
ACANP16112 AL358176.2-201ENST00000425769 204 ntBASIC1.1□□□□□ -2.23
ACANP16112 AC093893.1-201ENST00000505781 510 ntTSL 5 BASIC1.1□□□□□ -2.23
ACANP16112 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC1.1□□□□□ -2.23
ACANP16112 RNA5SP436-201ENST00000516020 115 ntBASIC1.1□□□□□ -2.23
ACANP16112 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.1□□□□□ -2.23
ACANP16112 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.1□□□□□ -2.23
ACANP16112 CBX3P2-202ENST00000583365 535 ntBASIC1.1□□□□□ -2.23
ACANP16112 MIR3935-201ENST00000583472 104 ntBASIC1.1□□□□□ -2.23
ACANP16112 SLCO1B3-202ENST00000381545 2805 ntAPPRIS P1 TSL 2 BASIC1.1□□□□□ -2.23
ACANP16112 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.1□□□□□ -2.23
ACANP16112 HMGB3P2-201ENST00000411913 584 ntBASIC1.09□□□□□ -2.23
ACANP16112 HMGN2P38-201ENST00000423806 265 ntBASIC1.09□□□□□ -2.23
ACANP16112 CKS1BP5-201ENST00000434172 273 ntBASIC1.09□□□□□ -2.23
ACANP16112 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.09□□□□□ -2.23
ACANP16112 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.09□□□□□ -2.23
ACANP16112 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.09□□□□□ -2.23
ACANP16112 RNU6-1334P-201ENST00000516032 105 ntBASIC1.09□□□□□ -2.23
ACANP16112 RNU6-964P-201ENST00000516524 69 ntBASIC1.09□□□□□ -2.23
ACANP16112 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.09□□□□□ -2.23
ACANP16112 SETP7-201ENST00000552169 453 ntBASIC1.09□□□□□ -2.23
ACANP16112 SUB1P4-201ENST00000566062 339 ntBASIC1.09□□□□□ -2.23
ACANP16112 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC1.09□□□□□ -2.23
ACANP16112 AL159169.2-201ENST00000610061 1269 ntBASIC1.09□□□□□ -2.23
ACANP16112 AC011472.4-201ENST00000615848 491 ntBASIC1.09□□□□□ -2.23
ACANP16112 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC1.09□□□□□ -2.23
ACANP16112 PCF11-AS1-201ENST00000602322 1516 ntBASIC1.09□□□□□ -2.23
ACANP16112 SGO1P2-201ENST00000429458 1589 ntBASIC1.09□□□□□ -2.24
ACANP16112 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC1.09□□□□□ -2.24
ACANP16112 Z85994.2-201ENST00000434327 452 ntBASIC1.09□□□□□ -2.24
ACANP16112 MTCYBP12-201ENST00000440559 1134 ntBASIC1.09□□□□□ -2.24
ACANP16112 AC092989.1-201ENST00000481235 277 ntBASIC1.09□□□□□ -2.24
ACANP16112 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.09□□□□□ -2.24
ACANP16112 CALCRL-201ENST00000392370 5155 ntAPPRIS P1 TSL 1 (best) BASIC1.09□□□□□ -2.24
ACANP16112 SEC63P1-201ENST00000425785 1258 ntBASIC1.08□□□□□ -2.24
ACANP16112 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC1.08□□□□□ -2.24
ACANP16112 RSL24D1P2-201ENST00000445584 366 ntBASIC1.08□□□□□ -2.24
ACANP16112 RPS23P4-201ENST00000487908 423 ntBASIC1.08□□□□□ -2.24
ACANP16112 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.08□□□□□ -2.24
ACANP16112 RNU6-113P-201ENST00000516653 101 ntBASIC1.08□□□□□ -2.24
ACANP16112 CD24P2-201ENST00000565486 219 ntBASIC1.08□□□□□ -2.24
ACANP16112 RPL23AP78-201ENST00000599928 470 ntBASIC1.08□□□□□ -2.24
ACANP16112 AC073413.2-201ENST00000604332 360 ntBASIC1.08□□□□□ -2.24
ACANP16112 CCDC30-201ENST00000340612 2664 ntAPPRIS P2 TSL 5 BASIC1.08□□□□□ -2.24
ACANP16112 XIAPP3-201ENST00000312918 795 ntBASIC1.08□□□□□ -2.24
ACANP16112 Y_RNA.294-201ENST00000364916 102 ntBASIC1.08□□□□□ -2.24
ACANP16112 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC1.08□□□□□ -2.24
ACANP16112 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.08□□□□□ -2.24
ACANP16112 EZH2P1-201ENST00000431167 291 ntBASIC1.08□□□□□ -2.24
ACANP16112 VN1R96P-201ENST00000446052 858 ntBASIC1.08□□□□□ -2.24
ACANP16112 TRAV31-201ENST00000502780 342 ntBASIC1.08□□□□□ -2.24
ACANP16112 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.08□□□□□ -2.24
ACANP16112 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC1.08□□□□□ -2.24
ACANP16112 AL590099.1-201ENST00000615276 138 ntBASIC1.08□□□□□ -2.24
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms