Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 NDUFB4P7-201ENST00000423198 363 ntBASIC3.21□□□□□ -1.9
VIMP08670 AL356867.1-201ENST00000429623 299 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC109583.1-201ENST00000432156 268 ntBASIC3.21□□□□□ -1.9
VIMP08670 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 RPL35AP22-201ENST00000436855 335 ntBASIC3.21□□□□□ -1.9
VIMP08670 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.21□□□□□ -1.9
VIMP08670 RPL7P36-201ENST00000444633 681 ntBASIC3.21□□□□□ -1.9
VIMP08670 AL162389.1-201ENST00000449233 177 ntBASIC3.21□□□□□ -1.9
VIMP08670 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 AL008723.1-201ENST00000452181 590 ntTSL 5 BASIC3.21□□□□□ -1.9
VIMP08670 ATG12P2-201ENST00000456830 416 ntBASIC3.21□□□□□ -1.9
VIMP08670 OR2A20P-203ENST00000498397 1268 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 AC093297.2-205ENST00000508123 572 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 AC006445.2-201ENST00000510061 472 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC093297.1-201ENST00000511712 591 ntTSL 4 BASIC3.21□□□□□ -1.9
VIMP08670 TTC39CP1-201ENST00000512513 755 ntBASIC3.21□□□□□ -1.9
VIMP08670 NPM1P41-201ENST00000512920 831 ntBASIC3.21□□□□□ -1.9
VIMP08670 APOOP4-201ENST00000513530 597 ntBASIC3.21□□□□□ -1.9
VIMP08670 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.21□□□□□ -1.9
VIMP08670 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 RN7SKP43-201ENST00000516173 320 ntBASIC3.21□□□□□ -1.9
VIMP08670 SCARNA15.2-201ENST00000516409 127 ntBASIC3.21□□□□□ -1.9
VIMP08670 RNU6-1256P-201ENST00000516539 103 ntBASIC3.21□□□□□ -1.9
VIMP08670 Y_RNA.717-201ENST00000517106 92 ntBASIC3.21□□□□□ -1.9
VIMP08670 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC3.21□□□□□ -1.9
VIMP08670 MTATP6P15-201ENST00000527233 835 ntBASIC3.21□□□□□ -1.9
VIMP08670 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 LRRC34P1-201ENST00000542742 915 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.21□□□□□ -1.9
VIMP08670 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC3.21□□□□□ -1.9
VIMP08670 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.21□□□□□ -1.9
VIMP08670 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC3.21□□□□□ -1.9
VIMP08670 AL353778.1-201ENST00000603149 408 ntBASIC3.21□□□□□ -1.9
VIMP08670 TUG1_2.1-201ENST00000614234 87 ntBASIC3.21□□□□□ -1.9
VIMP08670 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC012150.2-201ENST00000621300 544 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC131159.1-201ENST00000621854 213 ntBASIC3.21□□□□□ -1.9
VIMP08670 AL138713.1-201ENST00000624026 2130 ntBASIC3.21□□□□□ -1.9
VIMP08670 AC127502.3-201ENST00000636170 1206 ntBASIC3.21□□□□□ -1.9
VIMP08670 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
VIMP08670 AC006378.2-201ENST00000623178 2476 ntBASIC3.2□□□□□ -1.9
VIMP08670 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
VIMP08670 AC233263.6-201ENST00000631132 1963 ntBASIC3.2□□□□□ -1.9
VIMP08670 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.2□□□□□ -1.9
VIMP08670 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.2□□□□□ -1.9
VIMP08670 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.2□□□□□ -1.9
VIMP08670 STATH-201ENST00000246895 598 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
VIMP08670 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VIMP08670 OR6C70-201ENST00000327335 939 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VIMP08670 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VIMP08670 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
VIMP08670 AL359837.1-201ENST00000381357 287 ntBASIC3.2□□□□□ -1.9
VIMP08670 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
VIMP08670 RPL21P75-201ENST00000396599 483 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL21P28-201ENST00000401418 483 ntBASIC3.2□□□□□ -1.9
VIMP08670 AL592114.1-201ENST00000403842 483 ntBASIC3.2□□□□□ -1.9
VIMP08670 RN7SKP111-201ENST00000410349 271 ntBASIC3.2□□□□□ -1.9
VIMP08670 RNA5SP229-201ENST00000410809 99 ntBASIC3.2□□□□□ -1.9
VIMP08670 RAB28P1-201ENST00000411517 641 ntBASIC3.2□□□□□ -1.9
VIMP08670 UBE2FP1-201ENST00000416536 447 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL7P10-201ENST00000417407 739 ntBASIC3.2□□□□□ -1.9
VIMP08670 TAAR7P-201ENST00000436141 242 ntBASIC3.2□□□□□ -1.9
VIMP08670 AC009237.8-201ENST00000445492 379 ntBASIC3.2□□□□□ -1.9
VIMP08670 AP1S2P1-201ENST00000457344 379 ntBASIC3.2□□□□□ -1.9
VIMP08670 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC3.2□□□□□ -1.9
VIMP08670 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.2□□□□□ -1.9
VIMP08670 RPL21P39-201ENST00000463605 483 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL21P93-201ENST00000480465 489 ntBASIC3.2□□□□□ -1.9
VIMP08670 AC233702.1-201ENST00000482905 502 ntBASIC3.2□□□□□ -1.9
VIMP08670 AC087190.1-201ENST00000484462 480 ntBASIC3.2□□□□□ -1.9
VIMP08670 AC093591.1-201ENST00000491435 481 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL21P129-201ENST00000491732 478 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPS15AP36-201ENST00000492022 382 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL30P5-201ENST00000494923 336 ntBASIC3.2□□□□□ -1.9
VIMP08670 RPL21P16-201ENST00000495531 483 ntBASIC3.2□□□□□ -1.9
VIMP08670 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
VIMP08670 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.2□□□□□ -1.9
VIMP08670 FCF1P8-201ENST00000510322 597 ntBASIC3.2□□□□□ -1.9
VIMP08670 RNU6-1129P-201ENST00000515964 104 ntBASIC3.2□□□□□ -1.9
VIMP08670 RNU6-678P-201ENST00000516832 109 ntBASIC3.2□□□□□ -1.9
VIMP08670 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
VIMP08670 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.2□□□□□ -1.9
VIMP08670 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC3.2□□□□□ -1.9
VIMP08670 LYZ-203ENST00000549690 669 ntTSL 2 BASIC3.2□□□□□ -1.9
VIMP08670 MTCO3P13-201ENST00000577757 781 ntBASIC3.2□□□□□ -1.9
VIMP08670 AP001004.1-201ENST00000582468 324 ntBASIC3.2□□□□□ -1.9
VIMP08670 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.2□□□□□ -1.9
VIMP08670 AC026790.2-201ENST00000606282 430 ntBASIC3.2□□□□□ -1.9
VIMP08670 AC091965.4-201ENST00000607691 587 ntBASIC3.2□□□□□ -1.9
VIMP08670 MIR378J-201ENST00000611988 109 ntBASIC3.2□□□□□ -1.9
VIMP08670 AP000676.3-201ENST00000623299 569 ntBASIC3.2□□□□□ -1.9
VIMP08670 RNA5SP196-201ENST00000625967 102 ntBASIC3.2□□□□□ -1.9
VIMP08670 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.2□□□□□ -1.9
VIMP08670 AC092192.1-201ENST00000633154 1018 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 129.7 ms