Protein–RNA interactions for Protein: P08572

COL4A2, Collagen alpha-2(IV) chain, humanhuman

Predictions only

Length 1,712 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2P08572 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A2P08572 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A2P08572 CFAP100-207ENST00000510833 481 ntAPPRIS ALT2 TSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A2P08572 RNA5SP445-201ENST00000515889 115 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 RNU6-416P-201ENST00000516265 103 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 HMGN1P28-201ENST00000521340 364 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AP003049.1-201ENST00000529418 457 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AL359238.1-201ENST00000557770 744 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
COL4A2P08572 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 AL020997.3-201ENST00000602843 359 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC073387.2-201ENST00000604797 784 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC026741.1-201ENST00000605892 482 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC097460.3-201ENST00000623099 442 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC098679.5-201ENST00000624394 571 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.94□□□□□ -2.1
COL4A2P08572 CKAP2P1-201ENST00000555477 2049 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC000367.1-201ENST00000452711 1766 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 MTCO1P4-201ENST00000520516 1409 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
COL4A2P08572 RNA5SP37-201ENST00000365420 130 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 MIR607-201ENST00000385241 96 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 RPS7P2-201ENST00000435134 607 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 NDUFB4P6-201ENST00000436819 366 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AL929288.2-201ENST00000446368 407 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC1.94□□□□□ -2.1
COL4A2P08572 RPS26P21-201ENST00000475397 348 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 AC011352.3-201ENST00000505162 593 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC108729.3-201ENST00000513484 108 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 SNORA31.11-201ENST00000516528 139 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC1.94□□□□□ -2.1
COL4A2P08572 MIR4303-201ENST00000581299 66 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC113368.1-201ENST00000603736 382 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC016542.1-201ENST00000608259 493 ntBASIC1.94□□□□□ -2.1
COL4A2P08572 AC011124.2-201ENST00000518739 3222 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A2P08572 ZNF37BP-203ENST00000452306 1352 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC005336.3-201ENST00000623833 2679 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 RNU6-600P-201ENST00000362524 99 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 RNU6-1249P-201ENST00000363237 111 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 RNA5SP190-201ENST00000365222 118 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 MT-TC-201ENST00000387405 66 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 SNORD65C-201ENST00000390962 71 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 RNU4-78P-201ENST00000410940 126 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AL133384.1-201ENST00000412744 351 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.93□□□□□ -2.1
COL4A2P08572 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A2P08572 LINC01802-201ENST00000438824 523 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A2P08572 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A2P08572 AL096803.2-201ENST00000450032 677 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A2P08572 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A2P08572 AC004062.1-201ENST00000509926 645 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC121161.1-201ENST00000510606 652 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC016065.2-201ENST00000514530 444 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 RNU1-61P-201ENST00000516107 151 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC1.93□□□□□ -2.1
COL4A2P08572 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.93□□□□□ -2.1
COL4A2P08572 AC023796.1-201ENST00000536131 670 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A2P08572 ZNF192P1-203ENST00000565888 810 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AC010735.1-201ENST00000567305 1026 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC1.93□□□□□ -2.1
COL4A2P08572 AL049779.4-201ENST00000604500 156 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 DPRXP5-201ENST00000604662 539 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 AL121594.5-201ENST00000631724 573 ntBASIC1.93□□□□□ -2.1
COL4A2P08572 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A2P08572 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
COL4A2P08572 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A2P08572 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A2P08572 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.92□□□□□ -2.1
COL4A2P08572 RNU6-14P-201ENST00000384630 106 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 TMSB4XP8-201ENST00000402089 135 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 TMSB4XP6-201ENST00000415187 135 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A2P08572 TMSB4XP1-201ENST00000424567 135 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 RPP40P1-201ENST00000426762 456 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 AC114973.1-201ENST00000429057 632 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC1.92□□□□□ -2.1
COL4A2P08572 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A2P08572 RPS26P30-201ENST00000443431 335 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 ELOCP13-201ENST00000443934 329 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A2P08572 OR51B8P-201ENST00000449892 769 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 CDC42P1-201ENST00000456658 548 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A2P08572 RPS15AP1-201ENST00000457423 391 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 NCOR1P1-202ENST00000486162 291 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 RPL23AP63-201ENST00000498752 471 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A2P08572 MTND3P24-201ENST00000506306 329 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 RNA5SP468-201ENST00000516782 93 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A2P08572 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A2P08572 AP002906.1-201ENST00000603405 233 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 VN1R74P-201ENST00000613259 503 ntBASIC1.92□□□□□ -2.1
COL4A2P08572 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms