Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 RNU6-443P-201ENST00000384780 107 ntBASIC2.3□□□□□ -2.04
APOEP02649 RNU6-193P-201ENST00000410977 107 ntBASIC2.3□□□□□ -2.04
APOEP02649 RN7SKP192-201ENST00000411291 327 ntBASIC2.3□□□□□ -2.04
APOEP02649 AL365496.1-201ENST00000426885 215 ntBASIC2.3□□□□□ -2.04
APOEP02649 RPL31P54-201ENST00000429803 370 ntBASIC2.3□□□□□ -2.04
APOEP02649 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 ARPC3P1-201ENST00000437218 533 ntBASIC2.3□□□□□ -2.04
APOEP02649 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 RNF2P1-201ENST00000442955 1010 ntBASIC2.3□□□□□ -2.04
APOEP02649 AL929288.2-201ENST00000446368 407 ntBASIC2.3□□□□□ -2.04
APOEP02649 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 AC108734.3-201ENST00000481241 1165 ntBASIC2.3□□□□□ -2.04
APOEP02649 AC104435.1-201ENST00000483483 166 ntBASIC2.3□□□□□ -2.04
APOEP02649 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.3□□□□□ -2.04
APOEP02649 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 AC022509.2-201ENST00000540392 699 ntTSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 AL049835.1-201ENST00000555850 514 ntTSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 MIR1273D-201ENST00000577266 86 ntBASIC2.3□□□□□ -2.04
APOEP02649 MIR4658-201ENST00000584344 65 ntBASIC2.3□□□□□ -2.04
APOEP02649 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.3□□□□□ -2.04
APOEP02649 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
APOEP02649 AC013412.1-201ENST00000610687 192 ntBASIC2.3□□□□□ -2.04
APOEP02649 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
APOEP02649 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 AC009831.4-201ENST00000620744 325 ntBASIC2.3□□□□□ -2.04
APOEP02649 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.3□□□□□ -2.04
APOEP02649 MTND5P6-201ENST00000422338 1798 ntBASIC2.3□□□□□ -2.04
APOEP02649 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.3□□□□□ -2.04
APOEP02649 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
APOEP02649 CHORDC1-205ENST00000529726 4805 ntTSL 2 BASIC2.3□□□□□ -2.04
APOEP02649 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
APOEP02649 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOEP02649 AC008669.1-201ENST00000565823 2178 ntBASIC2.29□□□□□ -2.04
APOEP02649 MTND5P11-201ENST00000511037 1812 ntBASIC2.29□□□□□ -2.04
APOEP02649 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
APOEP02649 MTCO1P6-201ENST00000481192 1384 ntBASIC2.29□□□□□ -2.04
APOEP02649 RNU6-270P-201ENST00000364131 105 ntBASIC2.29□□□□□ -2.04
APOEP02649 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.29□□□□□ -2.04
APOEP02649 RNA5SP354-201ENST00000391247 136 ntBASIC2.29□□□□□ -2.04
APOEP02649 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.29□□□□□ -2.04
APOEP02649 UBE2V1P11-201ENST00000411559 285 ntBASIC2.29□□□□□ -2.04
APOEP02649 HMGN2P38-201ENST00000423806 265 ntBASIC2.29□□□□□ -2.04
APOEP02649 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC2.29□□□□□ -2.04
APOEP02649 AC093422.3-201ENST00000428506 305 ntBASIC2.29□□□□□ -2.04
APOEP02649 ZRANB2-AS2-204ENST00000430605 213 ntTSL 2 BASIC2.29□□□□□ -2.04
APOEP02649 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOEP02649 ACBD3-AS1-201ENST00000440540 535 ntTSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 RAC1P7-201ENST00000445367 377 ntBASIC2.29□□□□□ -2.04
APOEP02649 IFNA11P-201ENST00000446352 526 ntBASIC2.29□□□□□ -2.04
APOEP02649 AC090255.1-201ENST00000495779 349 ntBASIC2.29□□□□□ -2.04
APOEP02649 AC147055.4-201ENST00000504399 745 ntBASIC2.29□□□□□ -2.04
APOEP02649 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 RNA5SP200-201ENST00000516360 103 ntBASIC2.29□□□□□ -2.04
APOEP02649 RNU6-551P-201ENST00000516661 103 ntBASIC2.29□□□□□ -2.04
APOEP02649 RNU6-928P-201ENST00000516876 104 ntBASIC2.29□□□□□ -2.04
APOEP02649 ZNF705CP-201ENST00000530515 889 ntBASIC2.29□□□□□ -2.04
APOEP02649 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC2.29□□□□□ -2.04
APOEP02649 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC2.29□□□□□ -2.04
APOEP02649 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC2.29□□□□□ -2.04
APOEP02649 AL356280.1-201ENST00000603614 379 ntBASIC2.29□□□□□ -2.04
APOEP02649 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
APOEP02649 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
APOEP02649 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC2.29□□□□□ -2.04
APOEP02649 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOEP02649 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
APOEP02649 U8.2-201ENST00000363156 134 ntBASIC2.28□□□□□ -2.04
APOEP02649 RNU6-1155P-201ENST00000363554 107 ntBASIC2.28□□□□□ -2.04
APOEP02649 RNU6-461P-201ENST00000364195 107 ntBASIC2.28□□□□□ -2.04
APOEP02649 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
APOEP02649 RNU6-796P-201ENST00000391086 107 ntBASIC2.28□□□□□ -2.04
APOEP02649 AL024474.1-201ENST00000404655 591 ntBASIC2.28□□□□□ -2.04
APOEP02649 SNORA11.2-201ENST00000408318 127 ntBASIC2.28□□□□□ -2.04
APOEP02649 SNORA11.4-201ENST00000408823 129 ntBASIC2.28□□□□□ -2.04
APOEP02649 RN7SKP223-201ENST00000410582 62 ntBASIC2.28□□□□□ -2.04
APOEP02649 AC244453.4-201ENST00000419150 388 ntBASIC2.28□□□□□ -2.04
APOEP02649 AL139109.1-201ENST00000455491 297 ntBASIC2.28□□□□□ -2.04
APOEP02649 CABYRP1-201ENST00000465493 1045 ntBASIC2.28□□□□□ -2.04
APOEP02649 AC004263.1-201ENST00000479327 332 ntBASIC2.28□□□□□ -2.04
APOEP02649 AL135752.1-201ENST00000479477 471 ntBASIC2.28□□□□□ -2.04
APOEP02649 AC104090.1-201ENST00000506341 1171 ntBASIC2.28□□□□□ -2.04
APOEP02649 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC2.28□□□□□ -2.04
APOEP02649 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.28□□□□□ -2.04
APOEP02649 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.28□□□□□ -2.04
APOEP02649 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC2.28□□□□□ -2.04
APOEP02649 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.28□□□□□ -2.04
APOEP02649 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.28□□□□□ -2.04
APOEP02649 ADAM3B-201ENST00000569937 840 ntBASIC2.28□□□□□ -2.04
APOEP02649 AL163051.2-201ENST00000618976 735 ntBASIC2.28□□□□□ -2.04
APOEP02649 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC2.28□□□□□ -2.04
APOEP02649 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.28□□□□□ -2.04
APOEP02649 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC2.28□□□□□ -2.05
APOEP02649 ZBTB6-201ENST00000373659 4106 ntAPPRIS P1 TSL 1 (best) BASIC2.27□□□□□ -2.05
APOEP02649 AC004944.1-201ENST00000517807 3059 ntBASIC2.27□□□□□ -2.05
APOEP02649 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 115.7 ms