Protein–RNA interactions for Protein: P02549

SPTA1, Spectrin alpha chain, erythrocytic 1, humanhuman

Predictions only

Length 2,419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1P02549 FABP5P3-201ENST00000437960 408 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 SNRPGP3-201ENST00000469405 227 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 AC114786.4-201ENST00000508771 728 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC1.35□□□□□ -2.19
SPTA1P02549 AC114797.1-201ENST00000514003 728 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.35□□□□□ -2.19
SPTA1P02549 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.35□□□□□ -2.19
SPTA1P02549 AC084364.2-201ENST00000546924 395 ntBASIC1.35□□□□□ -2.19
SPTA1P02549 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC1.34□□□□□ -2.19
SPTA1P02549 RNU6-492P-201ENST00000363035 104 ntBASIC1.34□□□□□ -2.19
SPTA1P02549 AC093084.1-201ENST00000424233 687 ntBASIC1.34□□□□□ -2.19
SPTA1P02549 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.34□□□□□ -2.19
SPTA1P02549 VN1R108P-201ENST00000431580 830 ntBASIC1.34□□□□□ -2.19
SPTA1P02549 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.34□□□□□ -2.19
SPTA1P02549 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC1.34□□□□□ -2.19
SPTA1P02549 AC084851.1-201ENST00000529105 249 ntBASIC1.34□□□□□ -2.19
SPTA1P02549 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC1.34□□□□□ -2.19
SPTA1P02549 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.34□□□□□ -2.2
SPTA1P02549 DPPA2P1-201ENST00000428060 556 ntBASIC1.34□□□□□ -2.2
SPTA1P02549 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC1.34□□□□□ -2.2
SPTA1P02549 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC1.34□□□□□ -2.2
SPTA1P02549 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.34□□□□□ -2.2
SPTA1P02549 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC1.34□□□□□ -2.2
SPTA1P02549 SNORD116-26-201ENST00000516006 96 ntBASIC1.34□□□□□ -2.2
SPTA1P02549 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC1.34□□□□□ -2.2
SPTA1P02549 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC1.34□□□□□ -2.2
SPTA1P02549 ZNF734P-201ENST00000419494 1534 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 MT-CO2-201ENST00000361739 684 ntAPPRIS P1 BASIC1.33□□□□□ -2.2
SPTA1P02549 MIRLET7G-201ENST00000362280 84 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 AL358176.2-201ENST00000425769 204 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 AC073901.1-201ENST00000462471 408 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 CFHR2-203ENST00000476712 1020 ntAPPRIS ALT2 TSL 3 BASIC1.33□□□□□ -2.2
SPTA1P02549 AC023424.2-201ENST00000493479 777 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC1.33□□□□□ -2.2
SPTA1P02549 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC1.33□□□□□ -2.2
SPTA1P02549 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC1.33□□□□□ -2.2
SPTA1P02549 AC112191.3-201ENST00000604371 277 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 BNIP3P4-201ENST00000604946 565 ntBASIC1.33□□□□□ -2.2
SPTA1P02549 SEMG2-201ENST00000372769 2051 ntAPPRIS P1 TSL 1 (best) BASIC1.33□□□□□ -2.2
SPTA1P02549 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC1.33□□□□□ -2.2
SPTA1P02549 Y_RNA.294-201ENST00000364916 102 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 MIR222-201ENST00000384992 110 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC073264.1-201ENST00000411508 416 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.32□□□□□ -2.2
SPTA1P02549 TEX41-202ENST00000414256 604 ntTSL 5 BASIC1.32□□□□□ -2.2
SPTA1P02549 WARS2P1-201ENST00000429678 537 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC092754.2-201ENST00000463506 460 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC008885.2-201ENST00000509506 930 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 C1GALT1P2-201ENST00000510813 1104 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC1.32□□□□□ -2.2
SPTA1P02549 SNORA31.11-201ENST00000516528 139 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.32□□□□□ -2.2
SPTA1P02549 AC084882.1-201ENST00000561254 555 ntTSL 4 BASIC1.32□□□□□ -2.2
SPTA1P02549 AL118496.1-201ENST00000440201 1812 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 PABPC1P9-201ENST00000426076 1612 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 AL365400.1-201ENST00000431854 640 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 LINC01935-201ENST00000431897 437 ntTSL 3 BASIC1.32□□□□□ -2.2
SPTA1P02549 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.32□□□□□ -2.2
SPTA1P02549 RPL23AP35-201ENST00000451906 501 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 RPS29P20-201ENST00000489592 171 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 LINC02430-201ENST00000504755 476 ntTSL 3 BASIC1.32□□□□□ -2.2
SPTA1P02549 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC1.32□□□□□ -2.2
SPTA1P02549 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SPTA1P02549 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC1.32□□□□□ -2.2
SPTA1P02549 AC007342.9-201ENST00000623877 1385 ntBASIC1.32□□□□□ -2.2
SPTA1P02549 RNU6-461P-201ENST00000364195 107 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 RNU6-35P-201ENST00000384530 107 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.31□□□□□ -2.2
SPTA1P02549 HMGN2P18-201ENST00000450680 270 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 AC243772.1-201ENST00000451620 410 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 SEM1P1-201ENST00000506694 209 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 MTCO3P44-201ENST00000510977 541 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 SNORA31.24-201ENST00000517232 57 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 AL137804.1-201ENST00000528872 576 ntTSL 3 BASIC1.31□□□□□ -2.2
SPTA1P02549 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.31□□□□□ -2.2
SPTA1P02549 SNHG22-203ENST00000617833 660 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 DENND4A-202ENST00000443035 8665 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SPTA1P02549 SNORA16.1-201ENST00000364597 132 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 HMGB3P2-201ENST00000411913 584 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC1.31□□□□□ -2.2
SPTA1P02549 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC1.31□□□□□ -2.2
SPTA1P02549 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC1.31□□□□□ -2.2
SPTA1P02549 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC1.31□□□□□ -2.2
SPTA1P02549 FO624990.1-201ENST00000636373 85 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 CNOT6LP1-201ENST00000559681 1462 ntBASIC1.31□□□□□ -2.2
SPTA1P02549 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.31□□□□□ -2.2
SPTA1P02549 CCDC14-221ENST00000489746 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC1.31□□□□□ -2.2
SPTA1P02549 Y_RNA.85-201ENST00000363014 111 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 MIR320A-201ENST00000385302 82 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 U3.40-201ENST00000408706 208 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 HMGN2P35-201ENST00000412164 270 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC1.3□□□□□ -2.2
SPTA1P02549 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTA1P02549 VN1R96P-201ENST00000446052 858 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.3□□□□□ -2.2
SPTA1P02549 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTA1P02549 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC1.3□□□□□ -2.2
SPTA1P02549 uc_338.12-201ENST00000616344 181 ntBASIC1.3□□□□□ -2.2
SPTA1P02549 AL138955.1-201ENST00000622881 1040 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms