Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AC092473.1-201ENST00000441098 221 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 ELOCP16-201ENST00000444494 332 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A1P02462 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC073901.1-201ENST00000462471 408 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 CABYRP1-201ENST00000465493 1045 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC111193.1-201ENST00000504097 155 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC098799.2-201ENST00000509466 868 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC109464.2-201ENST00000510242 943 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC006063.1-201ENST00000512511 560 ntTSL 4 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC084851.1-201ENST00000529105 249 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC1.92□□□□□ -2.1
COL4A1P02462 AC012414.2-201ENST00000559474 187 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AP001542.2-201ENST00000593141 364 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 WISP1-OT1-201ENST00000602893 642 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
COL4A1P02462 AC110792.4-201ENST00000609843 298 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.92□□□□□ -2.1
COL4A1P02462 MIR7973-1-201ENST00000614683 76 ntBASIC1.92□□□□□ -2.1
COL4A1P02462 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC1.92□□□□□ -2.1
COL4A1P02462 AL589826.1-201ENST00000340697 249 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A1P02462 SUMO2P12-201ENST00000405924 140 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 AL513323.1-201ENST00000431862 1063 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A1P02462 BNIP3P2-201ENST00000441221 577 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
COL4A1P02462 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC1.91□□□□□ -2.1
COL4A1P02462 AC092691.3-201ENST00000482766 510 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A1P02462 AC025459.1-201ENST00000504072 156 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 HAUS1P3-201ENST00000523909 662 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC1.91□□□□□ -2.1
COL4A1P02462 AL731537.2-201ENST00000561565 951 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 DUXAP9-208ENST00000622815 614 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 AL157700.1-201ENST00000561973 1432 ntBASIC1.91□□□□□ -2.1
COL4A1P02462 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A1P02462 RNU6-883P-201ENST00000384597 107 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 DPPA3P1-201ENST00000448050 469 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 MTND2P3-201ENST00000452458 470 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A1P02462 AC092436.3-201ENST00000511788 257 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC1.9□□□□□ -2.1
COL4A1P02462 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC1.9□□□□□ -2.1
COL4A1P02462 AC233266.2-201ENST00000567067 528 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 AC068944.2-201ENST00000610373 403 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC1.9□□□□□ -2.1
COL4A1P02462 AC020658.4-201ENST00000613987 684 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 AC003001.2-201ENST00000616294 831 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 AC106730.3-201ENST00000624568 641 ntBASIC1.9□□□□□ -2.1
COL4A1P02462 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.9□□□□□ -2.11
COL4A1P02462 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A1P02462 CXADR-205ENST00000400169 1445 ntAPPRIS ALT2 TSL 5 BASIC1.9□□□□□ -2.11
COL4A1P02462 KLRF1-201ENST00000279545 1091 ntTSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A1P02462 TAF9BP2-201ENST00000400856 499 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 RPL31P52-201ENST00000407532 367 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 AC010385.1-201ENST00000412374 256 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A1P02462 PRELID3BP11-201ENST00000414230 479 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 HMGB1P27-201ENST00000431429 603 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 AL031663.1-201ENST00000437445 219 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 BTBD7P2-201ENST00000441962 620 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 HMGN2P21-201ENST00000447764 270 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A1P02462 TPRKBP1-201ENST00000456243 481 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 RPS26P21-201ENST00000475397 348 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 AC005912.1-201ENST00000495392 255 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC1.9□□□□□ -2.11
COL4A1P02462 VTRNA2-2P-201ENST00000516091 103 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 AC087518.1-201ENST00000524098 187 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A1P02462 AL161670.1-201ENST00000554348 137 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 ETFRF1-208ENST00000556402 874 ntTSL 3 BASIC1.9□□□□□ -2.11
COL4A1P02462 OR4H6P-202ENST00000603819 340 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 KLRF1-208ENST00000617889 1241 ntAPPRIS P1 TSL 1 (best) BASIC1.9□□□□□ -2.11
COL4A1P02462 AC116563.2-201ENST00000624751 535 ntBASIC1.9□□□□□ -2.11
COL4A1P02462 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
COL4A1P02462 AC006026.1-201ENST00000444025 1803 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC009975.1-201ENST00000634588 2698 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A1P02462 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC1.89□□□□□ -2.11
COL4A1P02462 SNORD51.1-201ENST00000365405 77 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 RNU6-185P-201ENST00000384421 107 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 RNY1P14-201ENST00000384426 108 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 ZNF468-202ENST00000396409 384 ntTSL 5 BASIC1.89□□□□□ -2.11
COL4A1P02462 PAICSP7-201ENST00000419829 962 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC009237.2-201ENST00000421358 284 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A1P02462 AC107398.1-201ENST00000486904 505 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A1P02462 AC093770.1-201ENST00000511559 571 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A1P02462 AC004923.2-201ENST00000529649 369 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC007375.1-201ENST00000554513 578 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A1P02462 AC090912.2-203ENST00000581177 477 ntTSL 3 BASIC1.89□□□□□ -2.11
COL4A1P02462 SNORA4-201ENST00000584302 138 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 AP003117.1-201ENST00000602771 554 ntBASIC1.89□□□□□ -2.11
COL4A1P02462 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC1.89□□□□□ -2.11
COL4A1P02462 AL354696.1-201ENST00000614652 497 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 78.3 ms