Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 MTND5P29-201ENST00000458676 1807 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 FAM35CP-201ENST00000554755 2470 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC092447.10-201ENST00000620607 1652 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.28□□□□□ -1.88
CLPTM1O96005 RNU6-192P-201ENST00000391253 100 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RPL21P3-201ENST00000395517 478 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RNA5SP56-201ENST00000410277 118 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 Y_RNA.598-201ENST00000410480 95 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RN7SKP159-201ENST00000410657 292 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RNU4-78P-201ENST00000410940 126 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 USP9YP13-201ENST00000417797 480 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 MTCYBP24-201ENST00000420387 1106 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AL445584.1-201ENST00000431451 330 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 SNORD42A-201ENST00000459584 64 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC146507.2-201ENST00000460608 476 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 KLF3P2-201ENST00000465138 268 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC034222.1-201ENST00000494052 532 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 RNU1-61P-201ENST00000516107 151 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RNU6-714P-201ENST00000516963 103 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC023632.4-201ENST00000517783 191 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.28□□□□□ -1.88
CLPTM1O96005 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC034105.4-201ENST00000568304 277 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC090615.1-201ENST00000577519 154 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 MIR4528-201ENST00000577763 90 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC087499.8-201ENST00000578406 226 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC006130.2-201ENST00000586202 326 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AL669831.4-202ENST00000590817 238 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 BNIP3P8-201ENST00000597863 560 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC131902.3-201ENST00000611767 581 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AL589743.7-201ENST00000612637 233 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC015540.1-201ENST00000615828 501 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC138393.3-201ENST00000618397 573 ntTSL 3 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AF117829.1-206ENST00000621883 3802 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC073476.4-201ENST00000628409 72 ntBASIC3.28□□□□□ -1.88
CLPTM1O96005 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC3.28□□□□□ -1.88
CLPTM1O96005 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.28□□□□□ -1.88
CLPTM1O96005 AC093010.3-201ENST00000570269 15214 ntBASIC3.28□□□□□ -1.89
CLPTM1O96005 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
CLPTM1O96005 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
CLPTM1O96005 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.27□□□□□ -1.89
CLPTM1O96005 Y_RNA.41-201ENST00000362646 102 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RNU6-1181P-201ENST00000384191 106 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RNU1-101P-201ENST00000391171 127 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RPS20P2-201ENST00000402520 389 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 MIR1250-201ENST00000408098 113 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RNU2-66P-201ENST00000410650 161 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RNU6-248P-201ENST00000410720 107 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AL139247.1-201ENST00000422768 325 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.27□□□□□ -1.89
CLPTM1O96005 AC104651.1-201ENST00000427559 735 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RPL23AP69-201ENST00000431134 458 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AL353705.1-201ENST00000433468 480 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 MTND1P34-201ENST00000438556 671 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC092641.1-201ENST00000440229 772 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC244505.5-201ENST00000443639 207 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 snoU13.8-201ENST00000458890 104 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RPL23AP67-201ENST00000465341 474 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 RN7SL542P-201ENST00000467147 294 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
CLPTM1O96005 AC107934.2-201ENST00000518653 310 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPTM1O96005 MTCYBP20-201ENST00000524239 1129 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AP003392.2-201ENST00000527269 208 ntBASIC3.27□□□□□ -1.89
CLPTM1O96005 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPTM1O96005 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPTM1O96005 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.27□□□□□ -1.89
CLPTM1O96005 AC034268.2-201ENST00000571784 482 ntBASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 884.9 ms