Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 AL590099.1-201ENST00000615276 138 ntBASIC2.79□□□□□ -1.96
PCF11O94913 AC121333.1-201ENST00000567488 2709 ntBASIC2.79□□□□□ -1.96
PCF11O94913 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC2.79□□□□□ -1.96
PCF11O94913 DEFB109C-201ENST00000382575 264 ntBASIC2.78□□□□□ -1.96
PCF11O94913 DEFB109B-201ENST00000382656 264 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AL121972.1-201ENST00000402023 252 ntBASIC2.78□□□□□ -1.96
PCF11O94913 GNGT1-203ENST00000429473 538 ntAPPRIS P1 TSL 1 (best) BASIC2.78□□□□□ -1.96
PCF11O94913 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC2.78□□□□□ -1.96
PCF11O94913 XKRY2-201ENST00000442362 1093 ntBASIC2.78□□□□□ -1.96
PCF11O94913 USP9YP15-201ENST00000442391 422 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC2.78□□□□□ -1.96
PCF11O94913 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.78□□□□□ -1.96
PCF11O94913 AC011604.1-201ENST00000545978 196 ntBASIC2.78□□□□□ -1.96
PCF11O94913 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC2.78□□□□□ -1.96
PCF11O94913 RPL23AP78-201ENST00000599928 470 ntBASIC2.78□□□□□ -1.96
PCF11O94913 UGP2-230ENST00000626380 276 ntTSL 5 BASIC2.78□□□□□ -1.96
PCF11O94913 SCN1A-219ENST00000641575 12874 ntAPPRIS ALT1 BASIC2.78□□□□□ -1.96
PCF11O94913 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCF11O94913 SNORD114-22-201ENST00000365423 72 ntBASIC2.78□□□□□ -1.96
PCF11O94913 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PCF11O94913 TOMM22P1-201ENST00000418578 312 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC2.78□□□□□ -1.96
PCF11O94913 MTCO3P17-201ENST00000443775 513 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AC104472.2-201ENST00000469035 601 ntBASIC2.78□□□□□ -1.96
PCF11O94913 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC2.78□□□□□ -1.96
PCF11O94913 ARL4AP2-201ENST00000507378 601 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC2.78□□□□□ -1.96
PCF11O94913 MTRNR2L5-201ENST00000512524 739 ntAPPRIS P1 BASIC2.78□□□□□ -1.96
PCF11O94913 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC2.78□□□□□ -1.96
PCF11O94913 AC067904.2-201ENST00000517322 1283 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.78□□□□□ -1.96
PCF11O94913 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.78□□□□□ -1.96
PCF11O94913 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC2.78□□□□□ -1.96
PCF11O94913 AC009220.3-201ENST00000604318 586 ntBASIC2.78□□□□□ -1.96
PCF11O94913 AC135803.1-201ENST00000608748 565 ntBASIC2.78□□□□□ -1.96
PCF11O94913 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC2.78□□□□□ -1.97
PCF11O94913 ATF1-201ENST00000262053 2181 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCF11O94913 MIR1323-201ENST00000408090 73 ntBASIC2.77□□□□□ -1.97
PCF11O94913 HSPE1P1-201ENST00000421494 318 ntBASIC2.77□□□□□ -1.97
PCF11O94913 SNRPEP4-201ENST00000435815 279 ntBASIC2.77□□□□□ -1.97
PCF11O94913 MTND2P29-201ENST00000438595 412 ntBASIC2.77□□□□□ -1.97
PCF11O94913 Z77249.1-201ENST00000444622 1175 ntBASIC2.77□□□□□ -1.97
PCF11O94913 RSL24D1P2-201ENST00000445584 366 ntBASIC2.77□□□□□ -1.97
PCF11O94913 MTND3P6-201ENST00000485242 339 ntBASIC2.77□□□□□ -1.97
PCF11O94913 LINC01455-201ENST00000503167 561 ntTSL 4 BASIC2.77□□□□□ -1.97
PCF11O94913 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.77□□□□□ -1.97
PCF11O94913 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.77□□□□□ -1.97
PCF11O94913 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC2.77□□□□□ -1.97
PCF11O94913 MIR8081-201ENST00000611533 95 ntBASIC2.77□□□□□ -1.97
PCF11O94913 AL390240.1-201ENST00000612950 384 ntBASIC2.77□□□□□ -1.97
PCF11O94913 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC2.77□□□□□ -1.97
PCF11O94913 UBE2L2-201ENST00000254302 429 ntBASIC2.76□□□□□ -1.97
PCF11O94913 Y_RNA.36-201ENST00000362602 112 ntBASIC2.76□□□□□ -1.97
PCF11O94913 RNU6-386P-201ENST00000362650 107 ntBASIC2.76□□□□□ -1.97
PCF11O94913 TRAJ49-201ENST00000390488 56 ntAPPRIS P1 BASIC2.76□□□□□ -1.97
PCF11O94913 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCF11O94913 RPL17P12-201ENST00000413391 526 ntBASIC2.76□□□□□ -1.97
PCF11O94913 USP9YP27-201ENST00000418455 438 ntBASIC2.76□□□□□ -1.97
PCF11O94913 AC109583.1-201ENST00000432156 268 ntBASIC2.76□□□□□ -1.97
PCF11O94913 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC2.76□□□□□ -1.97
PCF11O94913 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.76□□□□□ -1.97
PCF11O94913 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC2.76□□□□□ -1.97
PCF11O94913 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC2.76□□□□□ -1.97
PCF11O94913 AL590282.1-201ENST00000610379 1136 ntBASIC2.76□□□□□ -1.97
PCF11O94913 U6.48-201ENST00000618523 106 ntBASIC2.76□□□□□ -1.97
PCF11O94913 EYS-205ENST00000393380 5450 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
PCF11O94913 RNU6-1027P-201ENST00000383998 107 ntBASIC2.75□□□□□ -1.97
PCF11O94913 MTCYBP24-201ENST00000420387 1106 ntBASIC2.75□□□□□ -1.97
PCF11O94913 TRAPPC2P4-201ENST00000421750 331 ntBASIC2.75□□□□□ -1.97
PCF11O94913 RFESDP1-201ENST00000422350 461 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.75□□□□□ -1.97
PCF11O94913 LINC01851-201ENST00000443419 637 ntTSL 3 BASIC2.75□□□□□ -1.97
PCF11O94913 USP9YP10-201ENST00000454868 628 ntBASIC2.75□□□□□ -1.97
PCF11O94913 RNU6-711P-201ENST00000517255 106 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AP005660.1-201ENST00000522972 293 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AC104115.2-201ENST00000523026 687 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AC239860.2-201ENST00000525886 270 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AL009028.1-201ENST00000604895 802 ntBASIC2.75□□□□□ -1.97
PCF11O94913 AL121917.1-203ENST00000605534 577 ntBASIC2.75□□□□□ -1.97
PCF11O94913 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC2.75□□□□□ -1.97
PCF11O94913 AC117490.2-201ENST00000610042 594 ntBASIC2.75□□□□□ -1.97
PCF11O94913 GXYLT1P5-202ENST00000618830 589 ntTSL 5 BASIC2.75□□□□□ -1.97
PCF11O94913 INPP4B-223ENST00000630044 354 ntTSL 5 BASIC2.75□□□□□ -1.97
PCF11O94913 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC2.75□□□□□ -1.97
PCF11O94913 AC025034.1-201ENST00000552778 1711 ntTSL 3 BASIC2.75□□□□□ -1.97
PCF11O94913 RNU6-452P-201ENST00000384406 107 ntBASIC2.74□□□□□ -1.97
PCF11O94913 ERHP2-201ENST00000402323 299 ntBASIC2.74□□□□□ -1.97
PCF11O94913 AC005703.2-201ENST00000453339 343 ntTSL 2 BASIC2.74□□□□□ -1.97
PCF11O94913 snoU13.7-201ENST00000459220 104 ntBASIC2.74□□□□□ -1.97
PCF11O94913 AC107393.1-201ENST00000512403 346 ntBASIC2.74□□□□□ -1.97
PCF11O94913 EIF4EP5-201ENST00000528228 640 ntBASIC2.74□□□□□ -1.97
PCF11O94913 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.74□□□□□ -1.97
PCF11O94913 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.74□□□□□ -1.97
PCF11O94913 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.74□□□□□ -1.97
PCF11O94913 AC073055.1-201ENST00000456901 1621 ntBASIC2.74□□□□□ -1.97
PCF11O94913 OR4G1P-203ENST00000641984 1631 ntBASIC2.74□□□□□ -1.97
PCF11O94913 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC2.74□□□□□ -1.97
PCF11O94913 SYPL1P1-201ENST00000473622 768 ntBASIC2.74□□□□□ -1.97
PCF11O94913 AC025857.1-201ENST00000525252 377 ntBASIC2.74□□□□□ -1.97
PCF11O94913 G2E3-AS1-204ENST00000552511 402 ntTSL 2 BASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms