Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 AC234781.4-201ENST00000419384 244 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 RPL21P2-201ENST00000440049 481 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC0.67□□□□□ -2.3
USH2AO75445 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
USH2AO75445 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC0.67□□□□□ -2.3
USH2AO75445 DHFRP5-201ENST00000406944 564 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC0.67□□□□□ -2.3
USH2AO75445 BMI1P1-201ENST00000445879 941 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.67□□□□□ -2.3
USH2AO75445 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC0.67□□□□□ -2.3
USH2AO75445 RFPL1S-203ENST00000539579 330 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AC023043.3-201ENST00000593113 385 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AC023790.1-201ENST00000482174 347 ntBASIC0.67□□□□□ -2.3
USH2AO75445 NPM1P52-201ENST00000518264 846 ntBASIC0.67□□□□□ -2.3
USH2AO75445 CBX3P8-201ENST00000532412 525 ntBASIC0.67□□□□□ -2.3
USH2AO75445 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC0.67□□□□□ -2.3
USH2AO75445 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC0.67□□□□□ -2.3
USH2AO75445 RPL23AP78-201ENST00000599928 470 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AP006248.2-201ENST00000623309 592 ntBASIC0.67□□□□□ -2.3
USH2AO75445 MIR517C-201ENST00000385103 95 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AL442647.1-201ENST00000449485 481 ntTSL 5 BASIC0.67□□□□□ -2.3
USH2AO75445 AC093752.1-206ENST00000511823 336 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AP004242.1-201ENST00000533701 349 ntBASIC0.67□□□□□ -2.3
USH2AO75445 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
USH2AO75445 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC0.67□□□□□ -2.3
USH2AO75445 AC096558.2-201ENST00000546678 506 ntTSL 3 BASIC0.67□□□□□ -2.3
USH2AO75445 MIR4419B-201ENST00000577260 68 ntBASIC0.67□□□□□ -2.3
USH2AO75445 AC067852.7-201ENST00000623270 535 ntBASIC0.67□□□□□ -2.3
USH2AO75445 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC0.67□□□□□ -2.3
USH2AO75445 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
USH2AO75445 SNORA51.4-201ENST00000364993 124 ntBASIC0.66□□□□□ -2.3
USH2AO75445 RNA5SP363-201ENST00000365072 115 ntBASIC0.66□□□□□ -2.3
USH2AO75445 Y_RNA.457-201ENST00000384237 111 ntBASIC0.66□□□□□ -2.3
USH2AO75445 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC0.66□□□□□ -2.3
USH2AO75445 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC0.66□□□□□ -2.3
USH2AO75445 SYNE2-210ENST00000553455 674 ntTSL 2 BASIC0.66□□□□□ -2.3
USH2AO75445 AC005774.1-201ENST00000565247 567 ntTSL 4 BASIC0.66□□□□□ -2.3
USH2AO75445 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC0.66□□□□□ -2.3
USH2AO75445 AP000705.1-201ENST00000454567 350 ntBASIC0.66□□□□□ -2.3
USH2AO75445 RPL21P18-201ENST00000469899 480 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC090453.1-201ENST00000495560 436 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC0.66□□□□□ -2.3
USH2AO75445 AC138473.1-201ENST00000605717 526 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC012531.5-201ENST00000611375 151 ntBASIC0.66□□□□□ -2.3
USH2AO75445 ZNF209P-201ENST00000593450 2304 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AL512430.2-201ENST00000406786 339 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC060773.1-201ENST00000421698 310 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AL645568.3-201ENST00000433683 316 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AL020996.3-201ENST00000606617 222 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC097468.3-201ENST00000607956 456 ntBASIC0.66□□□□□ -2.3
USH2AO75445 MTCO1P6-201ENST00000481192 1384 ntBASIC0.66□□□□□ -2.3
USH2AO75445 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
USH2AO75445 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC0.66□□□□□ -2.3
USH2AO75445 MIR330-201ENST00000362196 94 ntBASIC0.66□□□□□ -2.3
USH2AO75445 Z95118.1-201ENST00000421372 247 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AIMP1P2-201ENST00000425294 312 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AL078601.1-201ENST00000444542 271 ntBASIC0.66□□□□□ -2.3
USH2AO75445 RPS27P29-201ENST00000463110 252 ntBASIC0.66□□□□□ -2.3
USH2AO75445 RPL23AP44-201ENST00000482216 473 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC069528.1-202ENST00000482888 637 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC021146.7-201ENST00000509604 775 ntBASIC0.66□□□□□ -2.3
USH2AO75445 FABP5P6-201ENST00000510588 409 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AP003072.2-201ENST00000527756 676 ntBASIC0.66□□□□□ -2.3
USH2AO75445 HSPE1P3-201ENST00000559254 309 ntBASIC0.66□□□□□ -2.3
USH2AO75445 AC104229.1-201ENST00000561364 255 ntBASIC0.66□□□□□ -2.3
USH2AO75445 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC0.66□□□□□ -2.3
USH2AO75445 SHOC2-201ENST00000265277 3691 ntTSL 2 BASIC0.66□□□□□ -2.3
USH2AO75445 AC008669.1-201ENST00000565823 2178 ntBASIC0.66□□□□□ -2.3
USH2AO75445 RPL23AP29-201ENST00000397284 453 ntBASIC0.65□□□□□ -2.3
USH2AO75445 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.65□□□□□ -2.3
USH2AO75445 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC0.65□□□□□ -2.3
USH2AO75445 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC0.65□□□□□ -2.3
USH2AO75445 BNIP3P4-201ENST00000604946 565 ntBASIC0.65□□□□□ -2.3
USH2AO75445 AC090517.3-201ENST00000625170 141 ntBASIC0.65□□□□□ -2.3
USH2AO75445 AP000553.5-201ENST00000641933 54 ntBASIC0.65□□□□□ -2.3
USH2AO75445 AC111188.2-201ENST00000529697 1387 ntBASIC0.65□□□□□ -2.3
USH2AO75445 LRRCC1-202ENST00000414626 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC0.65□□□□□ -2.3
USH2AO75445 AC009812.4-201ENST00000569134 1805 ntBASIC0.65□□□□□ -2.3
USH2AO75445 MTND4P12-201ENST00000498999 1377 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AL359851.1-201ENST00000569460 4997 ntBASIC0.65□□□□□ -2.31
USH2AO75445 RNU6-461P-201ENST00000364195 107 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC0.65□□□□□ -2.31
USH2AO75445 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC0.65□□□□□ -2.31
USH2AO75445 HMGN2P20-201ENST00000437531 273 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AP001960.1-201ENST00000506494 658 ntBASIC0.65□□□□□ -2.31
USH2AO75445 RNU4-60P-201ENST00000517239 135 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AL109653.1-201ENST00000603091 248 ntBASIC0.65□□□□□ -2.31
USH2AO75445 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC0.65□□□□□ -2.31
USH2AO75445 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC0.65□□□□□ -2.31
USH2AO75445 MIR7153-201ENST00000637758 57 ntBASIC0.65□□□□□ -2.31
USH2AO75445 IL33-203ENST00000456383 2501 ntTSL 5 BASIC0.65□□□□□ -2.31
USH2AO75445 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC0.65□□□□□ -2.31
USH2AO75445 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC0.65□□□□□ -2.31
USH2AO75445 TRAJ22-201ENST00000390515 63 ntAPPRIS P1 BASIC0.65□□□□□ -2.31
USH2AO75445 SSXP10-201ENST00000402595 565 ntBASIC0.65□□□□□ -2.31
USH2AO75445 AL691517.1-201ENST00000440833 1235 ntBASIC0.65□□□□□ -2.31
Retrieved 100 of 98,524 protein–RNA pairs in 104.8 ms