Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ZNF519P3-201ENST00000557158 1032 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AL133153.1-201ENST00000557756 303 ntBASIC3.15□□□□□ -1.91
SNX3O60493 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 COX6CP3-201ENST00000580869 223 ntBASIC3.15□□□□□ -1.91
SNX3O60493 ZNF415P1-201ENST00000582279 1166 ntBASIC3.15□□□□□ -1.91
SNX3O60493 ABBA01006766.1-201ENST00000584728 294 ntBASIC3.15□□□□□ -1.91
SNX3O60493 MIR548AB-201ENST00000584917 84 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AC015911.6-201ENST00000588445 457 ntTSL 3 BASIC3.15□□□□□ -1.91
SNX3O60493 AC083760.1-201ENST00000589621 670 ntBASIC3.15□□□□□ -1.91
SNX3O60493 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX3O60493 AC068790.3-201ENST00000602988 553 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AP002826.1-201ENST00000608835 315 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AL391813.2-201ENST00000609113 322 ntBASIC3.15□□□□□ -1.91
SNX3O60493 XIST_intron.1-201ENST00000619444 68 ntBASIC3.15□□□□□ -1.91
SNX3O60493 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC3.15□□□□□ -1.91
SNX3O60493 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.15□□□□□ -1.91
SNX3O60493 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX3O60493 CHD9-218ENST00000566029 13110 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
SNX3O60493 RNU5A-1-201ENST00000362698 116 ntBASIC3.14□□□□□ -1.91
SNX3O60493 SNORA23-201ENST00000365128 182 ntBASIC3.14□□□□□ -1.91
SNX3O60493 RNU5E-5P-201ENST00000365379 116 ntBASIC3.14□□□□□ -1.91
SNX3O60493 SNORA36C-201ENST00000384289 132 ntBASIC3.14□□□□□ -1.91
SNX3O60493 MIR493-201ENST00000385254 89 ntBASIC3.14□□□□□ -1.91
SNX3O60493 HMGN1P24-201ENST00000412282 298 ntBASIC3.14□□□□□ -1.91
SNX3O60493 RPL17P12-201ENST00000413391 526 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC016769.2-201ENST00000414815 475 ntBASIC3.14□□□□□ -1.91
SNX3O60493 UBE2FP1-201ENST00000416536 447 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX3O60493 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX3O60493 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX3O60493 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX3O60493 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX3O60493 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC3.14□□□□□ -1.91
SNX3O60493 RPL22P17-201ENST00000438729 315 ntBASIC3.14□□□□□ -1.91
SNX3O60493 MTND2P4-201ENST00000445034 1004 ntBASIC3.14□□□□□ -1.91
SNX3O60493 MTATP6P26-201ENST00000445926 662 ntBASIC3.14□□□□□ -1.91
SNX3O60493 SNORD105B-201ENST00000458770 79 ntBASIC3.14□□□□□ -1.91
SNX3O60493 LINC02045-201ENST00000460324 679 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX3O60493 RPS23P3-201ENST00000470993 430 ntBASIC3.14□□□□□ -1.91
SNX3O60493 RPS15AP36-201ENST00000492022 382 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX3O60493 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.14□□□□□ -1.91
SNX3O60493 AC064807.2-201ENST00000521188 672 ntTSL 3 BASIC3.14□□□□□ -1.91
SNX3O60493 HMGN1P28-201ENST00000521340 364 ntBASIC3.14□□□□□ -1.91
SNX3O60493 FAM60DP-201ENST00000524174 632 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC123904.2-201ENST00000548059 300 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC025254.1-201ENST00000550035 247 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX3O60493 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SNX3O60493 AC110760.3-201ENST00000598794 467 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC007038.2-201ENST00000608095 740 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC093838.1-201ENST00000613014 469 ntBASIC3.14□□□□□ -1.91
SNX3O60493 TUG1_2.1-201ENST00000614234 87 ntBASIC3.14□□□□□ -1.91
SNX3O60493 MESTIT1_2.1-201ENST00000616328 235 ntBASIC3.14□□□□□ -1.91
SNX3O60493 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.14□□□□□ -1.91
SNX3O60493 AC009159.1-201ENST00000618386 642 ntBASIC3.14□□□□□ -1.91
SNX3O60493 CAPZA2-214ENST00000628758 525 ntTSL 5 BASIC3.14□□□□□ -1.91
SNX3O60493 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC3.14□□□□□ -1.91
SNX3O60493 DDX10P1-201ENST00000448545 1933 ntBASIC3.14□□□□□ -1.91
SNX3O60493 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.14□□□□□ -1.91
SNX3O60493 MTND4P4-201ENST00000439033 1366 ntBASIC3.13□□□□□ -1.91
SNX3O60493 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.13□□□□□ -1.91
SNX3O60493 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX3O60493 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX3O60493 RNU1-39P-201ENST00000383897 165 ntBASIC3.13□□□□□ -1.91
SNX3O60493 SNORD116-2-201ENST00000384274 95 ntBASIC3.13□□□□□ -1.91
SNX3O60493 RNU1-13P-201ENST00000384499 162 ntBASIC3.13□□□□□ -1.91
SNX3O60493 SNORD116-6-201ENST00000384711 96 ntBASIC3.13□□□□□ -1.91
SNX3O60493 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC3.13□□□□□ -1.91
SNX3O60493 AL591034.1-201ENST00000407447 340 ntBASIC3.13□□□□□ -1.91
SNX3O60493 MIR1302-8-201ENST00000408342 128 ntBASIC3.13□□□□□ -1.91
SNX3O60493 USP9YP13-201ENST00000417797 480 ntBASIC3.13□□□□□ -1.91
SNX3O60493 RPL21P32-201ENST00000419877 477 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX3O60493 AL356583.2-201ENST00000426536 280 ntBASIC3.13□□□□□ -1.91
SNX3O60493 CYCSP4-201ENST00000429682 331 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 ATP5JP1-201ENST00000431631 322 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC114755.5-201ENST00000447760 831 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 AL162389.1-201ENST00000449233 177 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC093110.1-201ENST00000456363 602 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX3O60493 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 AC116337.2-201ENST00000477662 156 ntBASIC3.13□□□□□ -1.91
SNX3O60493 RPL31P60-201ENST00000478450 367 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC112204.1-201ENST00000502591 103 ntBASIC3.13□□□□□ -1.91
SNX3O60493 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SNX3O60493 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC3.13□□□□□ -1.91
SNX3O60493 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.13□□□□□ -1.91
SNX3O60493 APOOP4-201ENST00000513530 597 ntBASIC3.13□□□□□ -1.91
SNX3O60493 RNU6-201P-201ENST00000517100 61 ntBASIC3.13□□□□□ -1.91
SNX3O60493 IGKV2-26-201ENST00000518305 343 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.13□□□□□ -1.91
SNX3O60493 AP002748.2-201ENST00000528671 348 ntBASIC3.13□□□□□ -1.91
SNX3O60493 AP000857.1-201ENST00000532151 543 ntBASIC3.13□□□□□ -1.91
SNX3O60493 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC3.13□□□□□ -1.91
SNX3O60493 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.13□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 136.4 ms