Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 AC004866.2-201ENST00000438285 481 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC3.41□□□□□ -1.86
ZIC3O60481 AC016696.1-201ENST00000446949 318 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RAB9AP1-201ENST00000449393 573 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RPS24P6-201ENST00000452670 400 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC013267.1-201ENST00000458227 267 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AL049714.1-201ENST00000466686 347 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC068305.1-201ENST00000497406 726 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC019235.1-201ENST00000503847 207 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.41□□□□□ -1.86
ZIC3O60481 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC3.41□□□□□ -1.86
ZIC3O60481 AC114797.1-201ENST00000514003 728 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC026801.2-201ENST00000515352 425 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RNA5SP208-201ENST00000516156 78 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 SUMO2P20-201ENST00000520803 283 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC007991.1-201ENST00000522680 631 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AP001893.2-201ENST00000526949 202 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 MTCYBP41-201ENST00000528913 1123 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.41□□□□□ -1.86
ZIC3O60481 AL049634.3-201ENST00000604968 457 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC008277.2-201ENST00000605196 797 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AL034351.1-201ENST00000605288 668 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC3.41□□□□□ -1.86
ZIC3O60481 AL603758.1-201ENST00000618654 241 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 AC039056.2-201ENST00000622261 511 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 C2orf27A-204ENST00000623058 969 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 SATB1-AS1-226ENST00000625515 776 ntTSL 5 BASIC3.41□□□□□ -1.86
ZIC3O60481 ATP2B1-202ENST00000359142 6977 ntTSL 5 BASIC3.41□□□□□ -1.86
ZIC3O60481 AC018555.1-201ENST00000567548 1980 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZIC3O60481 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZIC3O60481 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
ZIC3O60481 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.41□□□□□ -1.86
ZIC3O60481 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.41□□□□□ -1.86
ZIC3O60481 PAPPA-AS1-201ENST00000445861 2450 ntBASIC3.41□□□□□ -1.86
ZIC3O60481 FEZ2-201ENST00000305852 1782 ntTSL 5 BASIC3.4□□□□□ -1.86
ZIC3O60481 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
ZIC3O60481 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.4□□□□□ -1.86
ZIC3O60481 BDP1P-201ENST00000582658 1990 ntBASIC3.4□□□□□ -1.86
ZIC3O60481 MEI4-201ENST00000602452 4800 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZIC3O60481 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 RNY1P12-201ENST00000364251 105 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 U3.11-201ENST00000364476 212 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 MIR554-201ENST00000384874 96 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
ZIC3O60481 HLFP1-201ENST00000402375 499 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 RNU6ATAC-201ENST00000408749 126 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 RNA5SP107-201ENST00000411358 122 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 PPP1R11P2-201ENST00000423543 382 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 MTCYBP5-201ENST00000423752 1135 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 MTCO1P39-201ENST00000426148 480 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC3.4□□□□□ -1.87
ZIC3O60481 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZIC3O60481 AL162389.1-201ENST00000449233 177 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 HMGB3P22-202ENST00000451823 572 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 HMGB3P30-201ENST00000457863 606 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 snoU13.24-201ENST00000458998 104 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AP000873.1-201ENST00000463987 400 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC010285.1-201ENST00000470580 392 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 TRBV12-2-201ENST00000489763 344 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC023194.1-201ENST00000493084 308 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 UBE2CP3-201ENST00000502715 450 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 ARL4AP2-201ENST00000507378 601 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC3.4□□□□□ -1.87
ZIC3O60481 AC009646.1-201ENST00000510455 318 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 SCARNA24.1-201ENST00000516465 137 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.4□□□□□ -1.87
ZIC3O60481 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 AL022099.1-201ENST00000604551 712 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC017083.3-201ENST00000609955 700 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC3.4□□□□□ -1.87
ZIC3O60481 TUG1_2.1-201ENST00000614234 87 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 CR392039.5-201ENST00000623201 510 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC034229.5-201ENST00000624258 185 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
ZIC3O60481 AC004925.1-201ENST00000624256 2706 ntBASIC3.4□□□□□ -1.87
ZIC3O60481 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.4□□□□□ -1.87
ZIC3O60481 CR848007.1-201ENST00000442354 1699 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 ENPP3-202ENST00000358229 3026 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.39□□□□□ -1.87
ZIC3O60481 DDX10P1-201ENST00000448545 1933 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 AL157700.1-201ENST00000561973 1432 ntBASIC3.39□□□□□ -1.87
ZIC3O60481 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
ZIC3O60481 AC007685.1-201ENST00000329806 452 ntBASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms