Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 RNU6-601P-201ENST00000384540 107 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 RNU6-308P-201ENST00000390957 107 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 RNU6-954P-201ENST00000411355 107 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA3O43365 RPL31P12-201ENST00000422587 358 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 PDSS1P1-201ENST00000422953 1114 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 PMCHL1-202ENST00000423102 261 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 AC092017.2-201ENST00000427600 362 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA3O43365 SNAP23P1-201ENST00000433229 246 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA3O43365 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA3O43365 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXA3O43365 ELOCP24-201ENST00000456370 334 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 CXorf51A-201ENST00000458472 431 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
HOXA3O43365 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA3O43365 RN7SKP258-201ENST00000517151 304 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXA3O43365 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXA3O43365 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA3O43365 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXA3O43365 AC068790.4-201ENST00000602474 263 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXA3O43365 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC3.95□□□□□ -1.78
HOXA3O43365 MIR6715B-201ENST00000637172 77 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
HOXA3O43365 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXA3O43365 AC083843.3-201ENST00000623679 2186 ntBASIC3.95□□□□□ -1.78
HOXA3O43365 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HOXA3O43365 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HOXA3O43365 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA3O43365 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
HOXA3O43365 TSACC-205ENST00000368255 751 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 LY6G5C-210ENST00000383237 674 ntAPPRIS P2 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 RNU6-639P-201ENST00000384074 107 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AL451107.1-201ENST00000416310 408 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA3O43365 CYP1B1-AS1-202ENST00000427168 484 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA3O43365 C4BPAP2-201ENST00000428434 478 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AC068287.1-201ENST00000430283 295 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 NRBF2P3-201ENST00000432731 865 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 AL137792.2-201ENST00000443484 235 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AL138921.2-201ENST00000443919 578 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 RNU6-953P-201ENST00000459154 107 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 RPL23AP56-201ENST00000460778 453 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 RN7SL441P-201ENST00000492388 296 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA3O43365 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.94□□□□□ -1.78
HOXA3O43365 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 AC104136.1-201ENST00000512969 394 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 RNU6-840P-201ENST00000517275 65 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 MEG8-215ENST00000555354 469 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 AGBL1-AS1-203ENST00000566878 865 ntTSL 3 BASIC3.94□□□□□ -1.78
HOXA3O43365 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA3O43365 AC209154.1-201ENST00000582156 337 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 MIR4697-201ENST00000582977 78 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 AL157817.1-201ENST00000614264 790 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 BPY2B-204ENST00000615850 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 BPY2C-204ENST00000618574 321 ntAPPRIS P5 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
HOXA3O43365 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
HOXA3O43365 AC004817.4-201ENST00000602396 3625 ntBASIC3.94□□□□□ -1.78
HOXA3O43365 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC3.94□□□□□ -1.78
HOXA3O43365 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC3.93□□□□□ -1.78
HOXA3O43365 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA3O43365 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA3O43365 AC063976.2-201ENST00000425667 3556 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 Y_RNA.28-201ENST00000362554 111 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.93□□□□□ -1.78
HOXA3O43365 Y_RNA.459-201ENST00000384251 102 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 AL391417.1-201ENST00000404100 426 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 RPS4XP7-201ENST00000406274 780 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 COX5BP7-201ENST00000414780 274 ntBASIC3.93□□□□□ -1.78
HOXA3O43365 TBCAP2-201ENST00000416175 326 ntBASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms