Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 NCAPGP2-201ENST00000557911 754 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC4.05□□□□□ -1.76
PHGDHO43175 AC128687.2-201ENST00000609657 566 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 AC073172.1-201ENST00000636967 851 ntTSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 MIR1321-201ENST00000637766 79 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 KCNJ16-209ENST00000589377 3684 ntAPPRIS P1 TSL 5 BASIC4.05□□□□□ -1.76
PHGDHO43175 AP001486.2-201ENST00000561652 5113 ntBASIC4.05□□□□□ -1.76
PHGDHO43175 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
PHGDHO43175 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.04□□□□□ -1.76
PHGDHO43175 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHGDHO43175 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHGDHO43175 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC4.04□□□□□ -1.76
PHGDHO43175 RNA5SP509-201ENST00000364577 119 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC4.04□□□□□ -1.76
PHGDHO43175 AC009480.2-201ENST00000422916 432 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC018630.2-202ENST00000422992 927 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHGDHO43175 AL358472.1-201ENST00000431295 329 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 RPS6P12-201ENST00000432491 726 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC000111.3-201ENST00000433478 193 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AL606489.2-201ENST00000433886 234 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 FDX1P2-201ENST00000450769 375 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 RNA5SP246-201ENST00000458909 119 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 RNU7-63P-201ENST00000459054 62 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC006512.1-201ENST00000468816 291 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 RN7SL481P-201ENST00000477764 299 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 RPL29P14-201ENST00000495837 428 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC099522.1-202ENST00000514718 367 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 RNU2-58P-201ENST00000516403 183 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 MIR2114-201ENST00000516645 80 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.04□□□□□ -1.76
PHGDHO43175 AC025575.1-201ENST00000548497 544 ntTSL 4 BASIC4.04□□□□□ -1.76
PHGDHO43175 GNRHR2P1-201ENST00000555315 631 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AL355836.1-201ENST00000555951 870 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC034105.3-201ENST00000565294 442 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC234778.2-201ENST00000566241 354 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC055876.1-202ENST00000567053 138 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC068135.2-201ENST00000569293 1028 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC4.04□□□□□ -1.76
PHGDHO43175 RPL23AP84-201ENST00000571193 464 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 WT1-AS_8.1-201ENST00000615200 275 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC093648.1-201ENST00000623546 606 ntBASIC4.04□□□□□ -1.76
PHGDHO43175 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.04□□□□□ -1.76
PHGDHO43175 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 SNCA-213ENST00000618500 3022 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
PHGDHO43175 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.04□□□□□ -1.76
PHGDHO43175 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHGDHO43175 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
PHGDHO43175 PNPT1P2-201ENST00000456768 2050 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 RNU4-48P-201ENST00000365559 182 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 RNU6-606P-201ENST00000384721 111 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 Y_RNA.573-201ENST00000384763 105 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 MIR454-201ENST00000390180 115 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 RNU6-1158P-201ENST00000391167 107 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AL591416.1-201ENST00000404015 867 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 OR51A5P-201ENST00000415429 942 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AL078601.2-201ENST00000429444 474 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 MTND1P2-201ENST00000430604 821 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 BTF3P10-201ENST00000433415 495 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 RBMX2P4-201ENST00000441256 376 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 DDX3P2-201ENST00000446138 111 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC4.03□□□□□ -1.76
PHGDHO43175 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC4.03□□□□□ -1.76
PHGDHO43175 RNU6-420P-201ENST00000458780 107 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 RPL36AP51-201ENST00000487216 318 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.03□□□□□ -1.76
PHGDHO43175 AC108475.1-201ENST00000507880 950 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 SNORD27.1-201ENST00000516319 72 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.03□□□□□ -1.76
PHGDHO43175 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC4.03□□□□□ -1.76
PHGDHO43175 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 MTND1P35-201ENST00000526739 508 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC4.03□□□□□ -1.76
PHGDHO43175 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC4.03□□□□□ -1.76
PHGDHO43175 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.03□□□□□ -1.76
PHGDHO43175 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC4.03□□□□□ -1.76
PHGDHO43175 AC243829.5-201ENST00000578447 247 ntTSL 5 BASIC4.03□□□□□ -1.76
PHGDHO43175 MIR5684-201ENST00000585074 65 ntBASIC4.03□□□□□ -1.76
PHGDHO43175 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.03□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms