Protein–RNA interactions for Protein: O15347

HMGB3, High mobility group protein B3, humanhuman

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3O15347 OFD1P11Y-201ENST00000418213 1177 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 COTL1P1-201ENST00000422309 375 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 HMGN2P38-201ENST00000423806 265 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC093422.3-201ENST00000428506 305 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGB3O15347 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGB3O15347 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 PSPHP1-201ENST00000450062 261 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 MTATP6P7-201ENST00000453315 681 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 RPL7P49-201ENST00000471402 708 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC128713.1-201ENST00000471495 306 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 AC025755.1-201ENST00000521306 278 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AP005902.1-201ENST00000521358 186 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 PIH1D2-206ENST00000528775 1025 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 AC021269.2-201ENST00000532318 330 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 SETP7-201ENST00000552169 453 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC095057.3-201ENST00000567102 1157 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGB3O15347 MIR5007-201ENST00000583098 95 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 AC008749.1-201ENST00000597650 306 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGB3O15347 AC013553.2-201ENST00000604244 589 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AL450336.1-201ENST00000605180 586 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 AP001486.3-201ENST00000615334 372 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC1.77□□□□□ -2.13
HMGB3O15347 MIR6766-201ENST00000622641 72 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 AL049641.1-201ENST00000441055 1948 ntBASIC1.77□□□□□ -2.13
HMGB3O15347 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC1.77□□□□□ -2.13
HMGB3O15347 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGB3O15347 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.76□□□□□ -2.13
HMGB3O15347 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGB3O15347 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGB3O15347 GDI2P1-201ENST00000429312 1336 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.76□□□□□ -2.13
HMGB3O15347 MIR518C-201ENST00000384822 101 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 MIR525-201ENST00000384978 85 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 MIR670-201ENST00000390142 98 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 RNA5SP338-201ENST00000410495 85 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 UBE2V1P11-201ENST00000411559 285 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGB3O15347 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGB3O15347 ZNF965P-201ENST00000432501 817 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL512844.2-201ENST00000433990 593 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 RPL26P6-201ENST00000440913 438 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGB3O15347 OSTCP8-201ENST00000445117 448 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 RPL23AP7-203ENST00000449021 469 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC1.76□□□□□ -2.13
HMGB3O15347 EEF1B2P7-201ENST00000451177 676 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 RFC5P1-201ENST00000454419 874 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGB3O15347 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC1.76□□□□□ -2.13
HMGB3O15347 AC023141.11-201ENST00000508864 202 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGB3O15347 RNU7-193P-201ENST00000516723 65 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 RNA5SP364-201ENST00000516938 78 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 MAL2-206ENST00000522187 547 ntTSL 4 BASIC1.76□□□□□ -2.13
HMGB3O15347 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.76□□□□□ -2.13
HMGB3O15347 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.76□□□□□ -2.13
HMGB3O15347 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGB3O15347 AC025918.2-201ENST00000558683 763 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 LRRC37A5P-203ENST00000580181 585 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AC009314.1-201ENST00000603871 304 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AC093732.2-201ENST00000607950 274 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL592148.2-201ENST00000612210 372 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL161423.1-201ENST00000613700 262 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AC006213.4-201ENST00000616184 634 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC1.76□□□□□ -2.13
HMGB3O15347 AC011330.2-201ENST00000621680 635 ntBASIC1.76□□□□□ -2.13
HMGB3O15347 ANKRD36C-201ENST00000295246 2272 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGB3O15347 ANKRD26P2-201ENST00000445530 1710 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC073346.2-201ENST00000624724 2058 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC1.75□□□□□ -2.13
HMGB3O15347 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGB3O15347 RNA5SP138-201ENST00000365098 114 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 MIR34A-201ENST00000385130 110 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 MIR325-201ENST00000385260 98 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMGB3O15347 AL512637.2-201ENST00000431287 1256 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGB3O15347 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
HMGB3O15347 AC000041.1-201ENST00000439655 175 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC073174.1-201ENST00000444155 415 ntTSL 5 BASIC1.75□□□□□ -2.13
HMGB3O15347 BMI1P1-201ENST00000445879 941 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 RPL23AP23-201ENST00000452590 471 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 RNA5SP233-201ENST00000459153 113 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 CABYRP1-201ENST00000465493 1045 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC079804.2-201ENST00000490376 200 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC080014.1-201ENST00000496877 1201 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC113420.1-201ENST00000507903 571 ntBASIC1.75□□□□□ -2.13
HMGB3O15347 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.75□□□□□ -2.13
HMGB3O15347 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.75□□□□□ -2.13
HMGB3O15347 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.7 ms