Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
CDX4O14627 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.9□□□□□ -1.95
CDX4O14627 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX4O14627 MIR4999-201ENST00000585029 91 ntBASIC2.9□□□□□ -1.95
CDX4O14627 BDH2P1-201ENST00000602288 736 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC112220.3-201ENST00000605502 502 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC090425.2-201ENST00000608818 501 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AL607023.1-201ENST00000620045 248 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC004009.2-201ENST00000623016 728 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC079248.2-201ENST00000623779 326 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AC091903.1-201ENST00000624322 454 ntBASIC2.9□□□□□ -1.95
CDX4O14627 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.9□□□□□ -1.95
CDX4O14627 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.9□□□□□ -1.95
CDX4O14627 RPS4XP5-202ENST00000449995 1334 ntBASIC2.9□□□□□ -1.95
CDX4O14627 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX4O14627 DDX43P2-201ENST00000604753 1354 ntBASIC2.89□□□□□ -1.95
CDX4O14627 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX4O14627 AC004925.1-201ENST00000624256 2706 ntBASIC2.89□□□□□ -1.95
CDX4O14627 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX4O14627 U3.12-201ENST00000364498 214 ntBASIC2.89□□□□□ -1.95
CDX4O14627 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX4O14627 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
CDX4O14627 RNU6-1200P-201ENST00000384162 107 ntBASIC2.89□□□□□ -1.95
CDX4O14627 RPL23AP29-201ENST00000397284 453 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL583834.1-201ENST00000406943 343 ntBASIC2.89□□□□□ -1.95
CDX4O14627 RNU2-71P-201ENST00000411395 189 ntBASIC2.89□□□□□ -1.95
CDX4O14627 SPATA17-AS1-201ENST00000415765 420 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 MTCYBP38-201ENST00000417160 1123 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL953862.1-201ENST00000423016 168 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL390023.1-201ENST00000428836 262 ntBASIC2.89□□□□□ -1.95
CDX4O14627 SNRPEP7-201ENST00000438350 220 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL117351.1-201ENST00000438864 766 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 AC118469.1-201ENST00000442943 488 ntBASIC2.89□□□□□ -1.95
CDX4O14627 MTND2P4-201ENST00000445034 1004 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AL606662.1-201ENST00000445763 553 ntBASIC2.89□□□□□ -1.95
CDX4O14627 CHODL-AS1-201ENST00000447175 1117 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX4O14627 AL392046.1-203ENST00000450106 651 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX4O14627 NAA50-206ENST00000493454 964 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX4O14627 HSPE1P23-201ENST00000509838 286 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC093281.2-201ENST00000510153 597 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC006499.2-201ENST00000513470 337 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC117532.1-201ENST00000514638 323 ntBASIC2.89□□□□□ -1.95
CDX4O14627 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
CDX4O14627 AC109635.4-202ENST00000531666 412 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 LINC01493-203ENST00000534756 509 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX4O14627 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC2.89□□□□□ -1.95
CDX4O14627 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC2.89□□□□□ -1.95
CDX4O14627 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC2.89□□□□□ -1.95
CDX4O14627 AC116096.1-201ENST00000566804 2314 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 AC090616.2-202ENST00000584248 222 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AP005264.4-201ENST00000592203 422 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 AC146944.4-201ENST00000602697 718 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC072039.2-201ENST00000608883 439 ntBASIC2.89□□□□□ -1.95
CDX4O14627 AC006023.2-201ENST00000609916 167 ntBASIC2.89□□□□□ -1.95
CDX4O14627 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC2.89□□□□□ -1.95
CDX4O14627 TMEM68-218ENST00000617782 2477 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 U7.8-201ENST00000619968 63 ntBASIC2.89□□□□□ -1.95
CDX4O14627 LINC01002-202ENST00000631412 459 ntTSL 5 BASIC2.89□□□□□ -1.95
CDX4O14627 ANKRD62P1-201ENST00000434304 1623 ntBASIC2.89□□□□□ -1.95
CDX4O14627 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC2.89□□□□□ -1.95
CDX4O14627 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.88□□□□□ -1.95
CDX4O14627 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.88□□□□□ -1.95
CDX4O14627 OR4G11P-202ENST00000642116 1414 ntBASIC2.88□□□□□ -1.95
CDX4O14627 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
CDX4O14627 MTND5P24-201ENST00000438892 1767 ntBASIC2.88□□□□□ -1.95
CDX4O14627 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX4O14627 MIR196B-201ENST00000384852 84 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AL360182.1-201ENST00000397433 468 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX4O14627 HMGB3P11-201ENST00000440127 604 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX4O14627 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 MTCYBP3-201ENST00000445588 1137 ntBASIC2.88□□□□□ -1.95
CDX4O14627 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC2.88□□□□□ -1.95
CDX4O14627 RPL37P4-201ENST00000448908 268 ntBASIC2.88□□□□□ -1.95
CDX4O14627 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC2.88□□□□□ -1.95
CDX4O14627 AL445669.2-201ENST00000454425 421 ntBASIC2.88□□□□□ -1.95
CDX4O14627 Y_RNA.638-201ENST00000459374 113 ntBASIC2.88□□□□□ -1.95
CDX4O14627 RPL21P104-201ENST00000464143 478 ntBASIC2.88□□□□□ -1.95
CDX4O14627 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 AC239860.2-201ENST00000525886 270 ntBASIC2.88□□□□□ -1.95
CDX4O14627 ALKBH3-AS1-202ENST00000527960 547 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX4O14627 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC2.88□□□□□ -1.95
CDX4O14627 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.88□□□□□ -1.95
CDX4O14627 CYCSP2-201ENST00000558168 301 ntBASIC2.88□□□□□ -1.95
CDX4O14627 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC2.88□□□□□ -1.95
CDX4O14627 AC122133.1-201ENST00000613964 233 ntBASIC2.88□□□□□ -1.95
CDX4O14627 SOX2OT_exon1.1-201ENST00000614902 232 ntBASIC2.88□□□□□ -1.95
CDX4O14627 AL357080.1-201ENST00000617394 239 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms