Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.77□□□□□ -1.97
AP3B1O00203 RNU6-28P-201ENST00000362378 107 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
AP3B1O00203 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.77□□□□□ -1.97
AP3B1O00203 U3.20-201ENST00000390909 217 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AL122016.1-201ENST00000403365 367 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 USP9YP19-201ENST00000412165 485 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC008850.1-201ENST00000427546 362 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 MTATP6P11-201ENST00000428071 670 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 GTF2IP20-201ENST00000431663 360 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3B1O00203 PIGFP3-201ENST00000441918 722 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AL671855.1-201ENST00000446875 1203 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 RPL37P4-201ENST00000448908 268 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC138853.1-201ENST00000503549 823 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3B1O00203 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC008837.1-201ENST00000511513 412 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC010374.2-201ENST00000512933 535 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC109329.2-201ENST00000519658 482 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC2.77□□□□□ -1.97
AP3B1O00203 ELOCP31-201ENST00000540463 467 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC2.77□□□□□ -1.97
AP3B1O00203 AC009163.5-201ENST00000575421 637 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AL445435.1-201ENST00000604232 665 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 HNRNPDLP4-201ENST00000605144 301 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AL158211.4-201ENST00000606988 584 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC096577.2-201ENST00000611455 153 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC107308.1-201ENST00000615897 301 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC004777.1-201ENST00000624317 287 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 AC120349.2-201ENST00000625002 298 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 UHMK1-204ENST00000545294 8117 ntTSL 2 BASIC2.77□□□□□ -1.97
AP3B1O00203 CDR1-202ENST00000625883 1485 ntBASIC2.77□□□□□ -1.97
AP3B1O00203 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
AP3B1O00203 RNA5SP21-201ENST00000410917 96 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AL513175.2-201ENST00000422071 443 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
AP3B1O00203 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC2.76□□□□□ -1.97
AP3B1O00203 AL139132.1-201ENST00000431587 344 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 CBWD4P-201ENST00000445695 655 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 NANOGNBP1-201ENST00000448444 480 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 AP1S2P1-201ENST00000457344 379 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 snoU13.22-201ENST00000459428 104 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.76□□□□□ -1.97
AP3B1O00203 AC114786.4-201ENST00000508771 728 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 AC114797.1-201ENST00000514003 728 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC022634.1-201ENST00000520765 532 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
AP3B1O00203 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC2.76□□□□□ -1.97
AP3B1O00203 AL133271.1-201ENST00000538229 291 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC022080.3-201ENST00000544433 482 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 TIMM9-207ENST00000555930 448 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 TRAV28-201ENST00000557548 323 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC087465.1-201ENST00000560574 245 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.76□□□□□ -1.97
AP3B1O00203 AC243773.3-201ENST00000613270 256 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC253576.2-201ENST00000618815 580 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 AC010297.1-201ENST00000623948 149 ntBASIC2.76□□□□□ -1.97
AP3B1O00203 PCNP-208ENST00000627393 136 ntTSL 2 BASIC2.76□□□□□ -1.97
AP3B1O00203 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.76□□□□□ -1.97
AP3B1O00203 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.76□□□□□ -1.97
AP3B1O00203 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
AP3B1O00203 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC2.75□□□□□ -1.97
AP3B1O00203 ASNSP3-201ENST00000451989 1306 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 RN7SKP226-201ENST00000364912 300 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC2.75□□□□□ -1.97
AP3B1O00203 UBA52P6-201ENST00000399822 382 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL031679.1-201ENST00000400616 525 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL079342.2-201ENST00000403367 482 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 HMGB1P17-201ENST00000403495 628 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL450338.1-201ENST00000407987 512 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
AP3B1O00203 AC092047.1-201ENST00000424997 240 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 MTCYBP45-201ENST00000435243 565 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 Z80107.1-201ENST00000436830 412 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 MTND4P6-201ENST00000438297 472 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC2.75□□□□□ -1.97
AP3B1O00203 DPPA3P1-201ENST00000448050 469 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 RSL24D1P3-201ENST00000449255 495 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC079776.3-201ENST00000450665 370 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC027673.1-201ENST00000456245 405 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 snoU13.8-201ENST00000458890 104 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 S100A11P2-201ENST00000467589 312 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.75□□□□□ -1.97
AP3B1O00203 MTND2P31-201ENST00000512602 616 ntBASIC2.75□□□□□ -1.97
AP3B1O00203 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.75□□□□□ -1.97
AP3B1O00203 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms