Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 RPS15AP36-201ENST00000492022 382 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 GYPA-203ENST00000503627 318 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 MTCYBP35-201ENST00000503630 1137 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 YWHAEP4-201ENST00000505390 198 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 MTCO3P44-201ENST00000510977 541 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 RNU1-92P-201ENST00000517017 135 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AP005597.4-201ENST00000526762 229 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 ARL2BPP2-201ENST00000550907 489 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 DNAJC19P9-201ENST00000555084 351 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC023824.4-201ENST00000562572 476 ntTSL 3 BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC098826.3-201ENST00000603823 466 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AL592494.3-201ENST00000609485 464 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AL354950.1-201ENST00000614150 568 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC021755.4-201ENST00000616620 456 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC006338.1-201ENST00000618453 749 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AC012640.5-201ENST00000623897 319 ntBASIC1.22□□□□□ -2.21
CPSF4LA6NMK7 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AL021407.1-201ENST00000404531 386 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AL136985.1-201ENST00000424592 395 ntTSL 3 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 LAMTOR3P1-201ENST00000428620 370 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC018359.1-201ENST00000442567 574 ntTSL 4 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 RNU1-123P-201ENST00000458950 160 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC078857.1-201ENST00000469870 667 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 MTCYBP18-201ENST00000501056 747 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC091826.2-201ENST00000504034 412 ntTSL 3 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC008083.2-201ENST00000546707 476 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AL442163.1-201ENST00000557251 515 ntTSL 5 BASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC068338.1-201ENST00000565567 176 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC069304.3-201ENST00000603938 1084 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 AC091932.3-201ENST00000624223 323 ntBASIC1.21□□□□□ -2.22
CPSF4LA6NMK7 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 RNU1-17P-201ENST00000363022 152 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 RNA5SP252-201ENST00000391131 119 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 RNU6-955P-201ENST00000410497 104 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL049649.1-202ENST00000412405 414 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 MTND4P11-201ENST00000417020 1058 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 MRPS33P4-201ENST00000434892 317 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 RPS29P23-201ENST00000458635 123 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 FAM172BP-201ENST00000487497 1089 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 KLRA1P-201ENST00000503499 986 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 HMGB1P22-201ENST00000505315 124 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 LINC02514-201ENST00000509058 498 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AC096745.1-201ENST00000509945 370 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 HMGB1P46-201ENST00000520062 610 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AP003033.1-201ENST00000527244 415 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AP000889.1-201ENST00000530968 660 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AC139103.1-201ENST00000534696 1030 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AC126177.3-201ENST00000551839 688 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL161670.1-201ENST00000554348 137 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL136298.1-201ENST00000557371 566 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 GLUD1P4-201ENST00000590914 418 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL096840.1-201ENST00000603287 93 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 AL357054.2-201ENST00000607644 423 ntTSL 5 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 GNAS-AS1_4.1-201ENST00000616546 112 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 ZNF209P-201ENST00000593450 2304 ntBASIC1.2□□□□□ -2.22
CPSF4LA6NMK7 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 ZNF519P1-201ENST00000449011 1626 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 SNORD56-201ENST00000413522 71 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 PAICSP7-201ENST00000419829 962 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 UBE2D3P2-201ENST00000424409 445 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 AL121890.1-201ENST00000435457 205 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 ELOCP13-201ENST00000443934 329 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 COX6CP12-201ENST00000446748 202 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 MLLT10P2-201ENST00000506434 249 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 CR936218.1-201ENST00000570454 304 ntTSL 2 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 COX6CP3-201ENST00000580869 223 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 AC009902.3-201ENST00000606235 2172 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 AC020923.1-201ENST00000624021 917 ntBASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 MARCH6-215ENST00000640713 231 ntTSL 5 BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CPSF4LA6NMK7 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 RNU6-457P-201ENST00000363999 107 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 RNU4ATAC16P-201ENST00000408512 126 ntBASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 LSM5-205ENST00000409952 687 ntTSL 4 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AL590705.2-201ENST00000420204 281 ntTSL 5 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC1.18□□□□□ -2.22
CPSF4LA6NMK7 RPS7P2-201ENST00000435134 607 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms