Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 GPBP1-201ENST00000264779 1786 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 SCN3A-203ENST00000409101 6599 ntAPPRIS ALT1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CCDC163A0A0D9SF12 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 TPTE2P4-201ENST00000258589 1605 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 RNU6-694P-201ENST00000364071 147 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 RN7SKP280-201ENST00000364196 304 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 CISD1P1-201ENST00000393907 327 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AL139039.1-201ENST00000401900 692 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 LAP3P1-201ENST00000403648 294 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 CRYBB2P1-203ENST00000415709 538 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 PDSS1P1-201ENST00000422953 1114 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 SRIP2-201ENST00000428470 166 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 CALM2P2-201ENST00000428512 440 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 MARK2P15-201ENST00000432204 2186 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC020550.1-201ENST00000447385 163 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 RPS24P6-201ENST00000452670 400 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 RNU7-180P-201ENST00000459240 63 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC004801.2-202ENST00000463559 283 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC117522.3-201ENST00000507974 584 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 MTND3P22-201ENST00000510932 243 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 OR8R1P-201ENST00000543943 764 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC005357.2-201ENST00000586473 583 ntTSL 2 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC243960.4-201ENST00000600532 288 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AC009643.2-201ENST00000603543 1448 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AL138889.2-201ENST00000603883 242 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AL365204.3-201ENST00000612448 685 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 AP001642.1-201ENST00000624727 2117 ntBASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 CD84-206ENST00000368054 8181 ntAPPRIS P3 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.67
CCDC163A0A0D9SF12 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC4.59□□□□□ -1.68
CCDC163A0A0D9SF12 OR8H2-201ENST00000313503 3088 ntAPPRIS P2 BASIC4.59□□□□□ -1.68
CCDC163A0A0D9SF12 ARHGAP42P3-201ENST00000443989 2508 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC011755.1-201ENST00000623763 2049 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 ADCY10-202ENST00000367851 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC087190.4-201ENST00000574616 8334 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 ZPLD1-202ENST00000466937 1531 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 OR5P1P-201ENST00000299512 925 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 RNU1-13P-201ENST00000384499 162 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AL022722.2-201ENST00000402519 180 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AP000580.1-201ENST00000404439 358 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 PPIAP31-201ENST00000405422 495 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 BX323014.1-201ENST00000412876 237 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 VDAC1P3-201ENST00000434069 851 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 CYCSP24-201ENST00000445119 316 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 PHBP16-201ENST00000446318 950 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 RNU6-953P-201ENST00000459154 107 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 HMGN2P26-201ENST00000463169 339 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 RPL21P104-201ENST00000464143 478 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AL049874.2-201ENST00000492636 288 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 PARP4P3-201ENST00000510265 317 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 VWA8P1-201ENST00000510889 176 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 TTC39CP1-201ENST00000512513 755 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 PANCR-202ENST00000513690 448 ntTSL 2 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 RN7SKP258-201ENST00000517151 304 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC073525.1-201ENST00000549762 543 ntTSL 3 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC006349.1-201ENST00000555526 235 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 MED28P6-201ENST00000558776 231 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC005668.1-201ENST00000571142 476 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC067852.3-201ENST00000589177 561 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC013553.2-201ENST00000604244 589 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AL355810.1-201ENST00000614629 552 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AL359547.2-201ENST00000615810 418 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 AC008725.1-201ENST00000605123 2263 ntBASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.58□□□□□ -1.68
CCDC163A0A0D9SF12 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.57□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms