Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 SPAM1-202ENST00000340011 2349 ntAPPRIS P4 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RNU6-534P-201ENST00000364877 106 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 SNORA20.2-201ENST00000383922 131 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 MT-TD-201ENST00000387419 68 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RNU6-780P-201ENST00000391030 104 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RPL7P60-201ENST00000397636 735 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RPS20P15-201ENST00000412792 311 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 CRYBB2P1-203ENST00000415709 538 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AL136322.1-201ENST00000422250 548 ntTSL 4 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC137499.1-201ENST00000427602 88 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC093156.1-201ENST00000440382 670 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC006011.1-201ENST00000442758 349 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC132479.1-201ENST00000449160 144 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RNU7-59P-201ENST00000459101 61 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC023598.1-201ENST00000472521 361 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC007182.2-201ENST00000489251 402 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RNU6-798P-201ENST00000516912 103 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 TRMT10BP1-201ENST00000519377 943 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 FAM92A1P1-201ENST00000528023 890 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC069240.1-201ENST00000548774 375 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 OR4T1P-201ENST00000554933 911 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RBBP8-210ENST00000581687 617 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC012669.1-201ENST00000603209 283 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC245517.5-201ENST00000611529 162 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 KCNQ1OT1_3.1-201ENST00000616504 116 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC244196.2-201ENST00000621184 411 ntAPPRIS P1 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC244100.1-202ENST00000621554 382 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 FRG1KP-201ENST00000623592 341 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC091905.1-201ENST00000624400 311 ntBASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.92□□□□□ -1.78
CCDC187A0A096LP49 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 MTX3-203ENST00000512560 4799 ntTSL 2 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 OR5J1P-201ENST00000313544 939 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 Y_RNA.1-201ENST00000352915 104 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 MIR208A-201ENST00000362287 71 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 ACEA_U3.1-201ENST00000363057 217 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RNY1P12-201ENST00000364251 105 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 MIR93-201ENST00000385024 80 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RNU2-62P-201ENST00000410868 191 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RN7SKP167-201ENST00000411047 285 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RNU6-516P-201ENST00000411381 104 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPL21P111-201ENST00000418453 477 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC004552.1-201ENST00000419089 348 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 ELOCP4-201ENST00000420090 333 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 NBDY-202ENST00000423617 543 ntAPPRIS P1 TSL 2 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 OR4K11P-201ENST00000431829 904 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPL35AP22-201ENST00000436855 335 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPS4XP4-201ENST00000443195 763 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC234775.1-201ENST00000454247 670 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPS26P3-201ENST00000470205 348 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPS3AP14-201ENST00000483907 780 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC090543.2-201ENST00000483963 348 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC004057.1-201ENST00000485827 348 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RPL7P23-201ENST00000493874 747 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC020893.1-201ENST00000502452 580 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RNU6-445P-201ENST00000516949 107 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 RNA5SP337-201ENST00000517007 109 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AP001893.2-201ENST00000526949 202 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AP000857.1-201ENST00000532151 543 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AL133271.1-201ENST00000538229 291 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC135001.1-201ENST00000544546 283 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 MIR3167-201ENST00000579623 85 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC008752.3-201ENST00000588113 712 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AP001429.1-201ENST00000602568 530 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AL139286.1-201ENST00000604465 483 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 SNORA51-201ENST00000606420 132 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC008035.1-201ENST00000607353 448 ntTSL 3 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC083798.2-205ENST00000608015 575 ntTSL 5 BASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC009233.1-201ENST00000616477 371 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 AC004825.2-201ENST00000616634 455 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.91□□□□□ -1.78
CCDC187A0A096LP49 CDKN3-212ENST00000620759 196 ntTSL 5 BASIC3.91□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms