Protein–RNA interactions for Protein: Q9Y5H4

PCDHGA1, Protocadherin gamma-A1, humanhuman

Predictions only

Length 931 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1Q9Y5H4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AC106791.2-201ENST00000604680 391 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AC090186.1-201ENST00000605991 572 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AL158211.4-201ENST00000606988 584 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 RNVU1-4-201ENST00000612985 164 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AL450472.3-201ENST00000615578 367 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AL607023.1-201ENST00000620045 248 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 AP002791.1-201ENST00000623291 381 ntBASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 LPP-220ENST00000617246 18220 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 USP33-201ENST00000357428 4155 ntTSL 5 BASIC3.28□□□□□ -1.88
PCDHGA1Q9Y5H4 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC092447.10-201ENST00000620607 1652 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 TAS2R14-202ENST00000537503 1858 ntAPPRIS P1 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-1078P-201ENST00000364522 103 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU1-140P-201ENST00000365040 165 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AL138885.1-201ENST00000405921 675 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC090774.1-201ENST00000435925 246 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 UBE2V1P13-201ENST00000436983 439 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 RPL26P6-201ENST00000440913 438 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 MTCYBP3-201ENST00000445588 1137 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC097262.1-201ENST00000452559 548 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AL359385.1-201ENST00000456509 365 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC00709-201ENST00000458168 494 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 OR7K1P-201ENST00000546439 926 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 DNAJC8P1-201ENST00000554535 372 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AL121576.1-201ENST00000556055 276 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC090888.2-201ENST00000559765 1144 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC136618.2-201ENST00000575091 400 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 MIR3609-201ENST00000582661 80 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 KLKP1-201ENST00000595979 403 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 RMST_8.1-201ENST00000610287 165 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC009268.2-201ENST00000621925 457 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006386.2-201ENST00000624491 75 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 AC012005.1-201ENST00000624575 75 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.27□□□□□ -1.89
PCDHGA1Q9Y5H4 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 SRP72P2-201ENST00000344851 1979 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 MIR422A-201ENST00000362286 90 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 SNORA80A-201ENST00000363922 136 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-777P-201ENST00000364265 104 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-7-201ENST00000364784 107 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-8-201ENST00000365467 107 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 RNU6-723P-201ENST00000383973 107 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 Y_RNA.548-201ENST00000384656 105 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 MIR184-201ENST00000384962 84 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 RPS3AP24-201ENST00000407896 734 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 LURAP1L-AS1-201ENST00000417638 799 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC108734.1-201ENST00000439549 399 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 HSPE1P6-201ENST00000479457 291 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093809.1-201ENST00000509155 340 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 ELOCP32-201ENST00000548625 324 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 ZNF321P-202ENST00000550843 495 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC099793.1-201ENST00000567538 285 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC099811.4-201ENST00000592536 496 ntTSL 2 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 VN1R90P-201ENST00000595717 726 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC006539.2-201ENST00000601729 572 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC021171.1-201ENST00000603137 706 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC093732.2-201ENST00000607950 274 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC017037.3-201ENST00000625016 472 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC092435.3-201ENST00000565538 3654 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 MBNL1-220ENST00000493459 4205 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 FAM35CP-201ENST00000554755 2470 ntBASIC3.26□□□□□ -1.89
PCDHGA1Q9Y5H4 AC011460.1-201ENST00000636268 1834 ntBASIC3.26□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms