Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RPS20P5-201ENST00000434808 360 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 OR4C10P-201ENST00000434991 931 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC002486.1-201ENST00000435098 391 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RPL36AP6-201ENST00000435770 321 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 HMGB3P12-201ENST00000438745 556 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AL138799.4-201ENST00000443939 643 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 PHBP16-201ENST00000446318 950 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC093392.2-201ENST00000450682 337 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 FGF7P3-201ENST00000454645 303 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC022364.2-201ENST00000457963 554 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RPL38P1-201ENST00000460914 211 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AL049874.1-201ENST00000489560 388 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RNU1-61P-201ENST00000516107 151 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-410P-201ENST00000517006 107 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 RN7SKP258-201ENST00000517151 304 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 PTS-202ENST00000524931 696 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 SOX5-AS1-201ENST00000539583 573 ntTSL 4 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC124947.2-202ENST00000552735 133 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AP005205.1-201ENST00000563503 508 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC017083.3-201ENST00000609955 700 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC026368.1-201ENST00000614934 690 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 MIR6863-201ENST00000636112 90 ntBASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 DNAH12-202ENST00000351747 9542 ntTSL 5 BASIC3.36□□□□□ -1.87
LSM4Q9Y4Z0 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 OR5P1P-201ENST00000299512 925 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RNU6-74P-201ENST00000384235 107 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 MIR23B-201ENST00000384832 97 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RPL32P23-201ENST00000397237 405 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AL513331.1-201ENST00000411908 397 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 MYCBP2-AS1-201ENST00000422231 519 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC011742.1-201ENST00000431448 434 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 MTATP6P30-201ENST00000443540 664 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AL121877.1-201ENST00000453704 622 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 DHFRP3-201ENST00000455595 559 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC126389.1-201ENST00000477436 290 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RPL31P60-201ENST00000478450 367 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RPS3AP14-201ENST00000483907 780 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 VN1R105P-201ENST00000486595 910 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RNA5SP73-201ENST00000516744 108 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AP006587.4-201ENST00000526053 529 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 LINC02398-201ENST00000536666 431 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 SUB1P2-201ENST00000556401 297 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 ZNF519P2-201ENST00000557032 169 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AL360157.1-201ENST00000565962 87 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AL110115.1-201ENST00000614396 364 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC090132.2-201ENST00000615881 347 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 RMST_9.1-201ENST00000619945 193 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC068792.1-201ENST00000621354 417 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC034229.5-201ENST00000624258 185 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC068137.3-201ENST00000639191 341 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 AC073869.6-201ENST00000640656 341 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 OR4G2P-202ENST00000641004 1759 ntBASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 LINC00158-201ENST00000332587 1476 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
LSM4Q9Y4Z0 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 LINC02471-203ENST00000641941 4752 ntBASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AMY2A-201ENST00000414303 1634 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.87
LSM4Q9Y4Z0 AC084357.3-201ENST00000541353 2751 ntTSL 5 BASIC3.34□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 100.8 ms