Protein–RNA interactions for Protein: Q9UIU6

SIX4, Homeobox protein SIX4, humanhuman

Predictions only

Length 781 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4Q9UIU6 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RNU1-70P-201ENST00000362618 164 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RNVU1-3-201ENST00000364313 161 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 MIR34B-201ENST00000385076 84 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 MTND4LP20-201ENST00000402379 270 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RPS20P2-201ENST00000402520 389 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 TANK-206ENST00000406287 875 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RPS3AP3-201ENST00000411933 242 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 HMGB3P23-201ENST00000414981 585 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 OR1AA1P-201ENST00000419597 916 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 BX890604.2-201ENST00000427883 474 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 C8orf59P1-201ENST00000429930 303 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC008264.1-201ENST00000447612 367 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 HMGB1P15-201ENST00000453854 435 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AP001992.1-205ENST00000462248 379 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RPL9P32-201ENST00000464118 620 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC078817.1-201ENST00000492623 435 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC020893.1-201ENST00000502452 580 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 NDUFB4P2-201ENST00000509515 391 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AF117829.1-203ENST00000520306 421 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AP003122.4-201ENST00000530980 758 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 RPL21P12-201ENST00000559810 515 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 MIR4276-201ENST00000584832 70 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AP003465.2-201ENST00000602571 373 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AL009028.1-201ENST00000604895 802 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC091834.1-201ENST00000614543 472 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AC095031.1-201ENST00000623685 672 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
SIX4Q9UIU6 ZNF734P-201ENST00000419494 1534 ntBASIC3.6□□□□□ -1.83
SIX4Q9UIU6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC092447.10-201ENST00000620607 1652 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 GABRG2-222ENST00000639975 3662 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL161781.1-201ENST00000354277 403 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 Y_RNA.46-201ENST00000362695 102 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 Y_RNA.234-201ENST00000364409 97 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RNA5SP72-201ENST00000364442 117 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 SNORA70.4-201ENST00000365509 134 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RNU6-259P-201ENST00000383999 107 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RNU6-339P-201ENST00000384310 107 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 PTMAP5-201ENST00000393073 333 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RPS3AP36-201ENST00000398190 775 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC126124.2-201ENST00000413542 321 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RPL30P2-201ENST00000414021 291 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL391704.1-203ENST00000414903 462 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 PSMA2P3-201ENST00000429685 675 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RGS5-217ENST00000451759 835 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 LINC01069-201ENST00000452933 546 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 snoU109.1-201ENST00000459339 135 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC021205.2-201ENST00000480069 347 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC034222.1-201ENST00000494052 532 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC107401.1-201ENST00000503426 685 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 TXNP6-201ENST00000510190 310 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 SNORA18.6-201ENST00000516792 115 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RNU6-714P-201ENST00000516963 103 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RNU6-1003P-201ENST00000517099 105 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC011611.1-201ENST00000552179 197 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 RPL21P5-201ENST00000554662 472 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC137800.2-201ENST00000574375 120 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AP001506.1-201ENST00000615444 211 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC108479.2-201ENST00000617314 601 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.59□□□□□ -1.83
SIX4Q9UIU6 AC006065.5-201ENST00000623427 349 ntBASIC3.59□□□□□ -1.83
SIX4Q9UIU6 MIR4496-201ENST00000635896 61 ntBASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms