Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 RNU6-928P-201ENST00000516876 104 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 RNU6-798P-201ENST00000516912 103 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC087276.1-201ENST00000529659 480 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC121758.2-201ENST00000553271 193 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AMZ2P1-203ENST00000565833 850 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 LRRC37A5P-203ENST00000580181 585 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC002487.1-201ENST00000604565 994 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 AC073308.1-201ENST00000623696 305 ntBASIC2.09□□□□□ -2.07
VPS29Q9UBQ0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
VPS29Q9UBQ0 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 RPAP3-202ENST00000380650 2149 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC009812.4-201ENST00000569134 1805 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 MIER3-202ENST00000381199 5188 ntAPPRIS ALT1 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC009902.3-201ENST00000606235 2172 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC006020.1-201ENST00000420179 1854 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 ZBTB8OSP1-201ENST00000342688 498 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 RNU6-270P-201ENST00000364131 105 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 RNU1-52P-201ENST00000384190 164 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 SNORD51-201ENST00000384320 80 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL121978.1-201ENST00000402778 359 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL024474.1-201ENST00000404655 591 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL355615.1-201ENST00000406187 641 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 HMGB1P11-201ENST00000413899 637 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 USP9YP27-201ENST00000418455 438 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 ARL2BPP3-201ENST00000421226 480 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL365204.2-201ENST00000446754 687 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 DPPA3P1-201ENST00000448050 469 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL139081.1-201ENST00000452207 382 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL135752.1-201ENST00000479477 471 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 MRPL42P6-201ENST00000486397 371 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 APOA2-210ENST00000491350 263 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 ANKRD36B-207ENST00000497329 649 ntTSL 1 (best) BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 ATP5F1P5-201ENST00000526403 760 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AL121917.1-203ENST00000605534 577 ntBASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
VPS29Q9UBQ0 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MIR524-201ENST00000385242 87 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 BTF3P7-201ENST00000407097 488 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MORF4L1P6-201ENST00000418771 268 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AL009174.1-201ENST00000426577 416 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AL714022.1-201ENST00000439897 151 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 FGF7P5-201ENST00000441829 291 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AC233279.1-201ENST00000455300 423 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MTCO3P2-201ENST00000457365 171 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 RNU6-420P-201ENST00000458780 107 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 RNU7-23P-201ENST00000459465 62 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AC116337.2-201ENST00000477662 156 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MTCYBP17-201ENST00000503579 789 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 NDUFB4P2-201ENST00000509515 391 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 SNRPGP18-201ENST00000553000 214 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AC068135.2-201ENST00000569293 1028 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 ISCA1P3-201ENST00000577104 373 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MIR3921-201ENST00000577308 85 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 AC013444.2-201ENST00000603317 787 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 TANK-201ENST00000259075 2152 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 MTND5P11-201ENST00000511037 1812 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 CKAP2P1-201ENST00000555477 2049 ntBASIC2.07□□□□□ -2.08
VPS29Q9UBQ0 DEFB108F-201ENST00000344638 222 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 RNU1-91P-201ENST00000364746 163 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 RNU4-53P-201ENST00000410828 140 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL133384.1-201ENST00000412744 351 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 MTND4P24-201ENST00000424002 397 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 MORF4L1P7-201ENST00000426038 703 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC098614.2-201ENST00000426040 255 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 MTCO3P30-201ENST00000426425 670 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 COX6CP12-201ENST00000446748 202 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL592447.1-201ENST00000447592 540 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AL118520.1-201ENST00000450770 291 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 Z82190.1-201ENST00000454534 490 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 AC092155.2-201ENST00000454675 477 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 HSPE1P6-201ENST00000479457 291 ntBASIC2.06□□□□□ -2.08
VPS29Q9UBQ0 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC2.06□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.6 ms