Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 AC092104.1-201ENST00000497346 1441 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 LPP-221ENST00000618621 18277 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 LPP-222ENST00000640853 18277 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 SNORD82-201ENST00000365530 70 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RNU6-851P-201ENST00000384565 107 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 MIR128-1-201ENST00000384921 82 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 HMGB1P17-201ENST00000403495 628 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL355379.1-201ENST00000405542 640 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RNU6ATAC40P-201ENST00000408580 137 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RN7SKP58-201ENST00000411010 305 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RPL23AP39-201ENST00000415533 405 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 FNDC3CP-201ENST00000420795 1155 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 CYCSP46-201ENST00000423569 204 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL139132.1-201ENST00000431587 344 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 KRR1-202ENST00000438169 975 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL512286.1-201ENST00000439244 400 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RPL31P3-201ENST00000458430 332 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC011825.1-201ENST00000484967 388 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 SCGB1D5P-201ENST00000515134 247 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC022080.3-201ENST00000544433 482 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 ACTR3BP3-201ENST00000565577 979 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC011471.1-201ENST00000585766 187 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 VN1R79P-201ENST00000593540 513 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC146944.4-201ENST00000602697 718 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 U73023.1-201ENST00000603134 700 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 DUXAP11-201ENST00000603858 526 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC097468.3-201ENST00000607956 456 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC107294.3-201ENST00000609211 526 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 MIR7844-201ENST00000616161 122 ntBASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.54□□□□□ -1.84
ECHDC1Q9NTX5 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AL390237.1-201ENST00000404226 1415 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AL049830.3-201ENST00000555108 1991 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 ZFAND6-212ENST00000559775 1602 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 RNU6-462P-201ENST00000362659 105 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 Y_RNA.77-201ENST00000362962 107 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 Y_RNA.97-201ENST00000363094 102 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 RNU4-75P-201ENST00000364621 146 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 MIR634-201ENST00000385208 97 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 MTCYBP36-201ENST00000404146 440 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC005517.2-201ENST00000424673 553 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 DLGAP5P1-201ENST00000430307 464 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AL138799.3-201ENST00000438968 350 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 KATNBL1P3-201ENST00000443475 909 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 RPL36AP33-201ENST00000450395 310 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 MTND4LP3-201ENST00000468320 276 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC078918.1-201ENST00000498515 228 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 RNF138P1-201ENST00000502765 546 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC114981.1-201ENST00000503897 678 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 GMPSP1-201ENST00000514075 579 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC093677.1-201ENST00000514414 678 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 FAM60DP-201ENST00000524174 632 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC103987.3-201ENST00000582071 292 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 MIR548AB-201ENST00000584917 84 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AL158063.1-201ENST00000615349 536 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AL590240.3-201ENST00000621416 943 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 AC008443.7-201ENST00000622195 246 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 CYP3A51P-201ENST00000633513 256 ntBASIC3.53□□□□□ -1.84
ECHDC1Q9NTX5 DDX43P2-201ENST00000604753 1354 ntBASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 RNU6-989P-201ENST00000362756 107 ntBASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 RNU1-35P-201ENST00000362782 153 ntBASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 AC096664.2-201ENST00000411843 406 ntBASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC3.52□□□□□ -1.85
ECHDC1Q9NTX5 MYO16-AS2-201ENST00000412809 436 ntTSL 3 BASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms