Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RPL37P4-201ENST00000448908 268 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 GSTA11P-201ENST00000452866 669 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AP004217.1-201ENST00000480579 346 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RN7SL432P-201ENST00000484057 298 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC023424.2-201ENST00000493479 777 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 LINC02144-201ENST00000511417 592 ntTSL 4 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 LINC02353-201ENST00000515181 849 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 SNORA19.3-201ENST00000516165 130 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 RPPH1-2P-201ENST00000516688 293 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 MAPK1-204ENST00000544786 951 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AMZ2P1-203ENST00000565833 850 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC103810.1-201ENST00000579873 453 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC126365.2-201ENST00000580630 379 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AL022067.1-201ENST00000602426 454 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 UCA1.1-201ENST00000620952 75 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 Z99496.1-201ENST00000469424 1477 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 AC097714.1-201ENST00000511272 1647 ntBASIC2.9□□□□□ -1.95
TM9SF3Q9HD45 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 USP45-208ENST00000500704 5826 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 FTLP6-201ENST00000355274 422 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 RNU6-1035P-201ENST00000384477 107 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 TAAR7P-201ENST00000436141 242 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 ARF4P4-201ENST00000439608 520 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC108938.1-201ENST00000451204 136 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC069444.1-201ENST00000489428 266 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 RNU6-1282P-201ENST00000516735 96 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 RNU6-928P-201ENST00000516876 104 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC090739.1-201ENST00000522190 708 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 ERP27-202ENST00000540097 993 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC087897.1-201ENST00000550134 156 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 ZNF28-207ENST00000594602 684 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 VN1R87P-201ENST00000596706 487 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC024153.1-201ENST00000603103 365 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC015871.2-201ENST00000603605 948 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC005014.3-201ENST00000605985 190 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC107294.1-201ENST00000609524 467 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AL161734.1-201ENST00000609720 557 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC109454.4-201ENST00000623411 649 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC087821.2-201ENST00000637086 450 ntBASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AC134980.1-208ENST00000640228 535 ntTSL 5 BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.89□□□□□ -1.95
TM9SF3Q9HD45 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 CACNB4-228ENST00000636598 7808 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 SNORA9.2-201ENST00000365361 133 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 SNRPEP2-201ENST00000397592 279 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RPL7P8-201ENST00000411964 730 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 SPA17P1-201ENST00000416656 452 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RPL26P6-201ENST00000440913 438 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RPL39P40-201ENST00000445481 146 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL109933.2-201ENST00000452651 260 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 MTND2P39-201ENST00000457230 764 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC026410.2-201ENST00000460281 156 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC087588.1-201ENST00000462203 316 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RN7SL633P-201ENST00000488974 297 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 OR4G11P-201ENST00000492842 939 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC012055.2-201ENST00000504167 335 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 MTND3P3-201ENST00000505004 126 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RNU6-1261P-201ENST00000517194 104 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 RN7SKP40-201ENST00000517211 242 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC005498.1-201ENST00000592125 465 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 NRBF2P5-201ENST00000603087 788 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL445435.1-201ENST00000604232 665 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC116312.1-201ENST00000606841 314 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AL627309.6-201ENST00000606857 840 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC107871.2-201ENST00000612894 502 ntBASIC2.88□□□□□ -1.95
TM9SF3Q9HD45 AC140725.3-201ENST00000616193 880 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms