Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 BLOC1S2P1-201ENST00000428431 301 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 FABP5P13-201ENST00000452144 328 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 SNORD13-201ENST00000459299 104 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 MRPL42P6-201ENST00000486397 371 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 SUMO1P1-201ENST00000497904 306 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 RAC1P5-201ENST00000512182 576 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 OR11H5P-201ENST00000554039 926 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 MED28P6-201ENST00000558776 231 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 OR4G1P-201ENST00000588632 938 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC093673.2-201ENST00000609674 331 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AC024595.1-201ENST00000623088 387 ntBASIC1.74□□□□□ -2.13
KIAA1549Q9HCM3 AL137003.2-201ENST00000606924 2538 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC093536.2-201ENST00000565257 1406 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC011460.1-201ENST00000636268 1834 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 RN7SKP226-201ENST00000364912 300 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-152P-201ENST00000384037 107 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-1197P-201ENST00000391183 107 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC092745.2-202ENST00000411880 369 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 Z75741.2-201ENST00000417272 1167 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC007677.1-201ENST00000445757 515 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 NAP1L1P3-201ENST00000462291 880 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 RPL23AP41-201ENST00000484754 458 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 OR52A4P-203ENST00000498233 1014 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 C1DP5-201ENST00000525775 383 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 RPS3AP23-202ENST00000574601 686 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC106791.2-201ENST00000604680 391 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC135178.6-201ENST00000605314 398 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 BNIP3P7-201ENST00000605641 516 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC012150.2-201ENST00000621300 544 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 AC008669.1-201ENST00000565823 2178 ntBASIC1.73□□□□□ -2.13
KIAA1549Q9HCM3 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-1159P-201ENST00000362933 107 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-1243P-201ENST00000364028 107 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-821P-201ENST00000390995 107 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6ATAC38P-201ENST00000408119 126 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AL121882.1-201ENST00000422893 417 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 snoU13.4-201ENST00000458916 104 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RN7SKP210-201ENST00000459176 261 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RPL23AP42-201ENST00000471152 471 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 UBE2Q2P9-201ENST00000490086 202 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC090255.1-201ENST00000495779 349 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 PRELID3BP4-201ENST00000515476 571 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 SNORA31.13-201ENST00000516624 135 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-295P-201ENST00000516901 104 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC022511.1-201ENST00000544089 476 ntTSL 2 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC125611.2-201ENST00000551907 647 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 MIR5694-201ENST00000581190 76 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AL356280.1-201ENST00000603614 379 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC091834.1-201ENST00000614543 472 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 LINC00216-201ENST00000623548 1126 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC087359.1-201ENST00000508335 1740 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 MIR583-201ENST00000384846 75 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 UBE2V1P9-201ENST00000414760 368 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RPS20P24-201ENST00000457473 361 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 ODF2L-216ENST00000486215 311 ntTSL 2 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RNU6-548P-201ENST00000517083 115 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 RN7SKP40-201ENST00000517211 242 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AP003385.6-201ENST00000531603 374 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 GNAI2P1-201ENST00000541815 315 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 EIF1AXP2-201ENST00000555940 413 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 KC877982.1-201ENST00000602313 470 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AL121917.1-203ENST00000605534 577 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 AL360181.4-201ENST00000621752 134 ntBASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC1.72□□□□□ -2.13
KIAA1549Q9HCM3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 SET-203ENST00000372688 801 ntTSL 2 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 RNU6-891P-201ENST00000384280 111 ntBASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AC007566.1-201ENST00000427458 643 ntTSL 5 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AL109741.2-201ENST00000455561 343 ntBASIC1.71□□□□□ -2.14
KIAA1549Q9HCM3 AC025033.1-201ENST00000463883 194 ntBASIC1.71□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 89.3 ms