Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 PARD3-204ENST00000374768 799 ntTSL 3 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RNU6-639P-201ENST00000384074 107 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 SNORD37.1-201ENST00000390968 65 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 MIR548K-201ENST00000408406 116 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC005517.2-201ENST00000424673 553 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC009965.2-201ENST00000425328 970 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RPL36AP6-201ENST00000435770 321 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 FTH1P1-201ENST00000437933 532 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AL138799.3-201ENST00000438968 350 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC006511.1-201ENST00000470614 315 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 VN1R17P-201ENST00000472048 1090 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AL136126.1-201ENST00000473603 402 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC110792.2-201ENST00000510278 224 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 LIAS-206ENST00000513731 826 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RNA5SP360-201ENST00000516555 118 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 OR4P1P-201ENST00000530808 1136 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RPL21P7-201ENST00000557463 483 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 XIAPP1-201ENST00000603162 600 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 MIR6864-201ENST00000617935 70 ntBASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 LRRC39-204ENST00000620882 1951 ntTSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 ZFAND6-223ENST00000616533 1653 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.76□□□□□ -1.65
BCAS3Q9H6U6 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 NBPF14-206ENST00000614999 10080 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 PCAT14-202ENST00000627127 3935 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 DMXL2-203ENST00000543779 10400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.187-201ENST00000363918 113 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 RNU6-1243P-201ENST00000364028 107 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 Y_RNA.445-201ENST00000384168 102 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 RNU11-4P-201ENST00000391149 133 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 RN7SKP158-201ENST00000410453 326 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC245054.2-201ENST00000415639 319 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC018630.2-202ENST00000422992 927 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AL451062.2-201ENST00000427515 271 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 OR2AS1P-201ENST00000427827 319 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MTND5P22-201ENST00000458380 195 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 FAM107B-218ENST00000479731 570 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC104164.2-201ENST00000496953 495 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC021146.2-201ENST00000504736 556 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC092436.1-201ENST00000506450 503 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AP001804.3-201ENST00000525146 880 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AP000857.1-201ENST00000532151 543 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC018630.1-201ENST00000541376 925 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC006064.5-201ENST00000541782 248 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC073525.1-202ENST00000550049 732 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MIR4504-201ENST00000577413 92 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 SLC14A2-AS1-204ENST00000592899 359 ntTSL 3 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 APOOP1-201ENST00000604695 592 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC016925.2-201ENST00000605108 242 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AL713922.2-201ENST00000619384 716 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MAPK10-349ENST00000641767 3661 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 MTCO1P12-201ENST00000414273 1543 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 FAM91A3P-201ENST00000456826 2544 ntBASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 AC015813.1-202ENST00000577267 4056 ntTSL 2 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.75□□□□□ -1.65
BCAS3Q9H6U6 PANK1-203ENST00000342512 2703 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.74□□□□□ -1.65
BCAS3Q9H6U6 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC4.74□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms