Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 AC079804.1-201ENST00000461922 436 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AC012181.1-201ENST00000479895 423 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 CDV3-208ENST00000511392 554 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 TTC39CP1-201ENST00000512513 755 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 RNU6-1271P-201ENST00000517049 105 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 IFITM8P-201ENST00000522529 394 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS11Q9H270 SMILR-201ENST00000533992 553 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS11Q9H270 APPL2-203ENST00000546731 684 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS11Q9H270 SNRPGP18-201ENST00000553000 214 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL110118.1-201ENST00000553543 400 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS11Q9H270 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AC010653.1-201ENST00000571108 881 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AC005255.1-201ENST00000593748 216 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 RNF219-AS1-205ENST00000605996 792 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 AC211433.2-201ENST00000608433 387 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AL031666.3-201ENST00000609320 1006 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 U4.1-201ENST00000620349 87 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 AC244517.12-201ENST00000623581 663 ntBASIC4.5□□□□□ -1.69
VPS11Q9H270 WDR75-207ENST00000631047 270 ntTSL 5 BASIC4.5□□□□□ -1.69
VPS11Q9H270 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 ARHGAP21-218ENST00000636789 4210 ntTSL 2 BASIC4.5□□□□□ -1.69
VPS11Q9H270 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.5□□□□□ -1.69
VPS11Q9H270 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC109780.1-201ENST00000451768 1344 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 ZNF700-202ENST00000482090 3113 ntAPPRIS ALT2 TSL 2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC092447.10-201ENST00000620607 1652 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS11Q9H270 OR1S2-201ENST00000302592 978 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC073343.1-201ENST00000328239 651 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 Y_RNA.46-201ENST00000362695 102 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 Y_RNA.148-201ENST00000363557 117 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 RNU6-744P-201ENST00000365557 107 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 SNORA51.8-201ENST00000384234 132 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 RNU6-1316P-201ENST00000384242 108 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 MIR105-2-201ENST00000385083 81 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 TRAV24-201ENST00000390453 343 ntAPPRIS P1 BASIC4.49□□□□□ -1.69
VPS11Q9H270 CISD1P1-201ENST00000393907 327 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 SPTLC1P2-201ENST00000407089 121 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 Y_RNA.615-201ENST00000410769 117 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 SNORA74C-2-201ENST00000411179 201 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 MAP1LC3BP1-201ENST00000417653 379 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AL451054.2-201ENST00000420896 202 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC092832.1-201ENST00000422934 400 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 KCNMA1-AS2-201ENST00000428936 427 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 RPS3AP54-201ENST00000435535 734 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 HMGB3P30-201ENST00000457863 606 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 RPL7AP6-201ENST00000477943 801 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC013356.1-201ENST00000489027 564 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 RN7SL808P-201ENST00000496066 299 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 LINC02438-201ENST00000505347 641 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 PARP4P3-201ENST00000510265 317 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC007016.1-201ENST00000512110 244 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC093303.1-201ENST00000514549 295 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC022616.6-201ENST00000520479 119 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 RPL23AP97-201ENST00000568955 471 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC4.49□□□□□ -1.69
VPS11Q9H270 MIR4680-201ENST00000580906 66 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 MIR3667-201ENST00000581025 74 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC005014.2-201ENST00000607795 599 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 MIR6853-201ENST00000619642 74 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.49□□□□□ -1.69
VPS11Q9H270 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 AC006020.1-201ENST00000420179 1854 ntBASIC4.49□□□□□ -1.69
VPS11Q9H270 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.49□□□□□ -1.69
VPS11Q9H270 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.49□□□□□ -1.69
VPS11Q9H270 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
VPS11Q9H270 AL049780.3-201ENST00000624612 1583 ntBASIC4.48□□□□□ -1.69
VPS11Q9H270 ZNF137P-201ENST00000456718 1920 ntBASIC4.48□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms