Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC234781.2-201ENST00000426370 994 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 RPS20P5-201ENST00000434808 360 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 SETP8-201ENST00000435341 628 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL359385.1-201ENST00000456509 365 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC092798.1-201ENST00000458542 409 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL049714.1-201ENST00000466686 347 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 LINC02465-202ENST00000508724 503 ntTSL 3 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 HIGD1AP13-201ENST00000509878 289 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC091826.1-201ENST00000514065 313 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 CASC16-202ENST00000563844 610 ntTSL 3 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC106782.4-201ENST00000568264 210 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 LARP7P3-201ENST00000579888 337 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC079089.3-201ENST00000603094 673 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC011451.2-201ENST00000604303 598 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AP000254.1-201ENST00000609934 520 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AL138478.1-201ENST00000612252 832 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 AC107871.2-201ENST00000612894 502 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 MTCO1P9-201ENST00000505577 1534 ntBASIC3.14□□□□□ -1.91
CCSER1Q9C0I3 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 RNU6-1027P-201ENST00000383998 107 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL590084.1-201ENST00000407885 387 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 SNORD88.1-201ENST00000408684 91 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 OR10R1P-201ENST00000441524 1141 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 TRGVB-201ENST00000453257 471 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL390783.1-203ENST00000457058 248 ntTSL 3 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL031183.1-201ENST00000457667 207 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 snoU13.8-201ENST00000458890 104 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 PANCR-202ENST00000513690 448 ntTSL 2 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL049838.1-201ENST00000563647 981 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC105224.1-201ENST00000587055 421 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 ZNF861P-201ENST00000588126 639 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 VN1R83P-201ENST00000595685 445 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 BNIP3P26-201ENST00000600827 554 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC005046.1-201ENST00000608515 625 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL157392.4-201ENST00000609756 345 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL050303.3-201ENST00000613704 284 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL357080.1-201ENST00000617394 239 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 MIR6130-201ENST00000619419 109 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL121895.2-201ENST00000619558 447 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC023510.2-201ENST00000622162 746 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC090617.7-201ENST00000623952 126 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AL390862.1-201ENST00000635467 1469 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 C1orf141-202ENST00000371006 2053 ntAPPRIS P3 TSL 2 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 ASNSP3-201ENST00000451989 1306 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 AC108206.1-201ENST00000570186 4159 ntBASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.13□□□□□ -1.91
CCSER1Q9C0I3 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 RNU6-799P-201ENST00000363567 107 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 RNA5SP139-201ENST00000364340 117 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 SNORA18.3-201ENST00000384122 132 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 RNU6-1197P-201ENST00000391183 107 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 SNORA26.7-201ENST00000391288 122 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL139281.1-201ENST00000422120 335 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 COTL1P1-201ENST00000422309 375 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 YWHAZP7-201ENST00000436906 631 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 THAP5P1-201ENST00000439089 262 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL135938.1-201ENST00000443141 297 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL606517.1-201ENST00000446914 387 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL009048.1-201ENST00000450437 298 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL355836.1-201ENST00000555951 870 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL132657.2-201ENST00000564417 358 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 OR4K8P-201ENST00000578842 1048 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 MSMB-202ENST00000582163 488 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 MIR3609-201ENST00000582661 80 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 VN1R78P-201ENST00000597393 564 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AL137843.1-201ENST00000605078 385 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 AC084035.1-201ENST00000634543 607 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 JMJD1C-210ENST00000542921 8149 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 SLC10A5P1-201ENST00000379063 1306 ntBASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
CCSER1Q9C0I3 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 SNORD116-12-201ENST00000384468 92 ntBASIC3.11□□□□□ -1.91
CCSER1Q9C0I3 MTATP6P20-201ENST00000414147 562 ntBASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms